Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR139W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [28..495] | [83..539] |
|
|
0.0 | [28..495] | [83..539] |
|
|
0.0 | [20..508] | [3..501] |
|
|
0.0 | [24..500] | [16..503] |
|
|
0.0 | [19..508] | [2..494] |
|
|
0.0 | [25..505] | [6..492] |
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0.0 | [24..506] | [14..502] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MKYLNLVFVL QLLISIKYAS FGRAFSLFED DTTFANLDKQ LKLPQNTQQT LKLDRLNHDD 60
61 PLFTTFISSV DTDYSLRLRT VDPSKLG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.441 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.482 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.718 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.552 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.718 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.552 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.497 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.482 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.462 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.395 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.379 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.372 | a.64.1 | Saposin |
| View | Download | 0.353 | a.4.1 | Homeodomain-like |
| View | Download | 0.254 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.252 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.252 | a.60.7 | 5' to 3' exonuclease, C-terminal subdomain |
| View | Download | 0.241 | a.77.1 | DEATH domain |
| View | Download | 0.221 | c.23.1 | CheY-like |
| View | Download | 0.217 | a.4.1 | Homeodomain-like |
| View | Download | 0.211 | c.47.1 | Thioredoxin-like |
| View | Download | 0.209 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.209 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.201 | d.26.1 | FKBP-like |
|
Region A: Residues: [88-245] |
1 11 21 31 41 51
| | | | | |
1 IDTVKQWSGY MDYKDSKHFF YWFFESRNDP ANDPIILWLN GGPGCSSFTG LLFELGPSSI 60
61 GADMKPIHNP YSWNNNASMI FLEQPLGVGF SYGDEKVSST KLAGKDAYIF LELFFEAFPH 120
121 LRSNDFHIAG ESYAGHYIPQ IAHEIVVKNP ERTFNLTS
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|
Region B: Residues: [340-382] |
1 11 21 31 41 51
| | | | | |
1 STDGMCYTGL RYVDQYMNFP EVQETLGSDV HNYSGCDNDV FTG
|
| Detection Method: | |
| Confidence: | 1496.0 |
| Match: | 1ysc__ |
| Description: | Serine carboxypeptidase II |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 4.09944423676394 | bayes_pls_golite062009 |
| peptidase activity | 2.49064988313037 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.10044305272656 | bayes_pls_golite062009 |
| catalytic activity | 1.39629727416851 | bayes_pls_golite062009 |
| palmitoyl-(protein) hydrolase activity | 1.3250951453762 | bayes_pls_golite062009 |
| palmitoyl-CoA hydrolase activity | 0.815337671271829 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.541803897301601 | bayes_pls_golite062009 |
| endopeptidase activity | 0.43631945855397 | bayes_pls_golite062009 |
| binding | 0.351031277062254 | bayes_pls_golite062009 |
|
Region A: Residues: [246-339] |
1 11 21 31 41 51
| | | | | |
1 VMIGNGITDP LIQADYYEPM ACGKGGYHPV LSSEECEKMS KAAGRCRRLN KLCYASKSSL 60
61 PCIVATAYCD SALLEPYINT GLNVYDIRGP CEDN
|
|
Region B: Residues: [383-508] |
1 11 21 31 41 51
| | | | | |
1 FLFTGDGSKP FQQYIAELLN HNIPVLIYAG DKDYICNWLG NHAWSNELEW INKRRYQRRM 60
61 LRPWVSKETG EELGQVKNYG PFTFLRIYDA GHMVPYDQPE ASLEMVNSWI SGNRAFSDLS 120
121 TLENAS
|
| Detection Method: | |
| Confidence: | 1496.0 |
| Match: | 1ysc__ |
| Description: | Serine carboxypeptidase II |
| Matching Structure (courtesy of the PDB): |
|
