| Protein: | EXO84 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 753 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXO84.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..753] | [1..753] |
|
|
0.0 | [168..748] | [4..541] |
|
|
0.0 | [111..744] | [4..569] |
|
|
0.0 | [175..745] | [2..493] |
|
|
2.0E-67 | [449..737] | [38..337] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MVEFSLKKAR NNWKHVKKSA SSPAKQKTPP SPAKPKQKTK KNPYSDLKDP ATSYTLPTIN 60
61 ARERSRVATS MQRRLSIHNT NYAPPTLDYS MPLPDMPNMI VPNDNVDSSH NNSSFTTENE 120
121 SVSSKGPSNS LNLSTADLSL NDSSYNKVPA RSAMRNT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [158-279] |
1 11 21 31 41 51
| | | | | |
1 VNPSGSNDPF NNSTSLRKML ANPHFNAKDF VHDKLGNASA ITIDKFTSNL TDLSIQVQEE 60
61 VKLNINKSYN EIMTVNNDLN VAMLELKRVR ANINDLNEVL DQCTKIAEKR LQLQDQIDQE 120
121 RQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.824 | N/A | N/A | a.7.8 | GAT domain |
|
Region A: Residues: [280-341] |
1 11 21 31 41 51
| | | | | |
1 GNFNNVESHS NSPALLPPLK AGQNGNLMRR DRSSVLILEK FWDTELDQLF KNVEGAQKFI 60
61 NS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [342-480] |
1 11 21 31 41 51
| | | | | |
1 TKGRHILMNS ANWMELNTTT GKPLQMVQIF ILNDLVLIAD KSRDKQNDFI VSQCYPLKDV 60
61 TVTQEEFSTK RLLFKFSNSN SSLYECRDAD ECSRLLDVIR KAKDDLCDIF HVEEENSKRI 120
121 RESFRYLQST QQTPGRENN
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1awe__ |
| Description: | Son of sevenless-1 (sos-1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [481-753] |
1 11 21 31 41 51
| | | | | |
1 RSPNKNKRRS MGGSITPGRN VTGAMDQYLL QNLTLSMHSR PRSRDMSSTA QRLKFLDEGV 60
61 EEIDIELARL RFESAVETLL DIESQLEDLS ERISDEELML LNLISLKIEQ RREAISSKLS 120
121 QSILSSNEIV HLKSGTENMI KLGLPEQALD LFLQNRSNFI QDLILQIGSV DNPTNYLTQL 180
181 AVIRFQTIKK TVEDFQDIFK ELGAKISSIL VDWCSDEVDN HFKLIDKQLL NDEMLSPGSI 240
241 KSSRKQIDGL KAVGLDFVYK LDEFIKKNSD KIR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
