| Protein: | POL30 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 258 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POL30.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-99 | [1..258] | [1..259] |
|
|
1.0E-98 | [1..258] | [1..259] |
|
|
2.0E-98 | [1..258] | [1..259] |
|
|
5.0E-98 | [1..258] | [1..259] |
|
|
6.0E-98 | [1..258] | [1..259] |
|
|
8.0E-98 | [1..258] | [1..259] |
|
|
8.0E-98 | [1..258] | [1..259] |
|
|
1.0E-95 | [1..258] | [1..259] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MLEAKFEEAS LFKRIIDGFK DCVQLVNFQC KEDGIIAQAV DDSRVLLVSL EIGVEAFQEY 60
61 RCDHPVTLGM DLTSLSKILR CGNNTDTLTL IADNTPDSII LLFEDTKKDR IAEYSLKLMD 120
121 IDADFLK
|
| Detection Method: |  |
| Confidence: | 1391.09691 |
| Match: | 1plq__ |
| Description: | Prolifirating cell nuclear antigen (PCNA) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA polymerase processivity factor activity | 9.9878881203193 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 5.01426276108174 | bayes_pls_golite062009 |
| DNA polymerase activity | 4.9656505576274 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 3.23598180825386 | bayes_pls_golite062009 |
| mismatched DNA binding | 2.75713709757781 | bayes_pls_golite062009 |
| DNA insertion or deletion binding | 2.48680473192192 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32553487472442 | bayes_pls_golite062009 |
| DNA binding | 2.24518789437215 | bayes_pls_golite062009 |
| binding | 1.88302251910664 | bayes_pls_golite062009 |
| dinucleotide insertion or deletion binding | 1.68153838099672 | bayes_pls_golite062009 |
| mismatch repair complex binding | 1.6296761041903 | bayes_pls_golite062009 |
| MutLalpha complex binding | 1.21442872292245 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.14392061238362 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.785542777582287 | bayes_pls_golite062009 |
| catalytic activity | 0.48077242755678 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.457118392479642 | bayes_pls_golite062009 |
| protein binding | 0.452894757163315 | bayes_pls_golite062009 |
| purine-specific mismatch base pair DNA N-glycosylase activity | 0.408841404605319 | bayes_pls_golite062009 |
| mismatch base pair DNA N-glycosylase activity | 0.387975438046246 | bayes_pls_golite062009 |
| transferase activity | 0.345371754708312 | bayes_pls_golite062009 |
|
Region A: Residues: [128-258] |
1 11 21 31 41 51
| | | | | |
1 IEELQYDSTL SLPSSEFSKI VRDLSQLSDS INIMITKETI KFVADGDIGS GSVIIKPFVD 60
61 MEHPETSIKL EMDQPVDLTF GAKYLLDIIK GSSLSDRVGI RLSSEAPALF QFDLKSGFLQ 120
121 FFLAPKFNDE E
|
| Detection Method: | |
| Confidence: | 1391.09691 |
| Match: | 1plq__ |
| Description: | Prolifirating cell nuclear antigen (PCNA) |
| Matching Structure (courtesy of the PDB): |
|
