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View Structure Prediction Details

Protein: ECM33
Organism: Saccharomyces cerevisiae
Length: 468 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM33.

Description E-value Query
Range
Subject
Range
ECM33 - GPI-anchored protein of unknown function, has a possible role in apical bud growth; GPI-anchoring on...
1.0E-65 [1..468] [1..468]
gi|15237409, gi|... - gi|15237409|ref|NP_199438.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis t...
3.0E-58 [25..462] [524..973]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFKNALTAT AILSASALAA NSTTSIPSSC SIGTSATATA QADLDKISGC STIVGNLTIT  60
   61 GDLGSAALAS IQEIDGSLTI FNSSSLSSFS A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.522879
Match: 1dnqA_
Description: No description for 1dnqA_ was found.

Predicted Domain #2
Region A:
Residues: [92-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSIKKITGDL NMQELIILTS ASFGSLQEVD SINMVTLPAI STFSTDLQNA NNIIVSDTTL  60
   61 ESVEGFSTLK KVNVFNINNN RYLNSFQSSL ESVSDSLQFS SNGDNTTLAF DNLVWANNIT 120
  121 LRDVNSISFG SLQTVNASLG FINNTLPSLN LTQLSKVGQS LSIVSNDELS KAAFSNLTTV 180
  181 GGGFIIANNT QLKVIDGFNK VQTVGGAIEV TGNFSTLDLS SLKSVRGGAN FDSSSSNFSC 240
  241 NALKKLQSNG AIQGDSFVCK NGATSTSVKL SSTSTESSKS SATSSASSSG DASNAQANVS 300
  301 ASASSSSSSS KKSKGAAPEL VPATSFMGVV AAVGVAYYKI KATICVSIIT LISSLMISLP 360
  361 FLFYYETVGS SLNFICR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 1jl5A_
Description: Leucine rich effector protein YopM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
receptor activity 1.46706519505919 bayes_pls_golite062009
binding 1.29581524164992 bayes_pls_golite062009
transmembrane receptor activity 1.1862168530335 bayes_pls_golite062009
protein binding 0.853548241721519 bayes_pls_golite062009
signal transducer activity 0.499118819144462 bayes_pls_golite062009
molecular transducer activity 0.499118819144462 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle