| Protein: | QDR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 689 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QDR3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..689] | [1..689] |
|
|
2.0E-62 | [67..593] | [1..509] |
|
|
2.0E-62 | [2..397] | [44..428] |
|
|
3.0E-61 | [196..682] | [108..544] |
|
|
2.0E-60 | [192..686] | [85..535] |
|
|
2.0E-57 | [211..682] | [142..573] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MQAQGSQSNV GSLRSNCSDN SLPNNHVMMH CDESSGTPHS EHNDYSYEKT NLESTASNSR 60
61 EHRDNQLSRL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.508 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.478 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.461 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.284 | a.5.2 | UBA-like |
| View | Download | 0.267 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.260 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.222 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.218 | d.58.12 | eEF-1beta-like |
| View | Download | 0.216 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.209 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
|
Region A: Residues: [71-281] |
1 11 21 31 41 51
| | | | | |
1 KSEEYVVPKN QRRGLLPQLA IIPEFKDARD YPPMMKKMIV FLIAFSSMMG PMGTSIIFPA 60
61 INSITTEFKT SVIMVNVSIG VYLLSLGVFP LWWSSLSELE GRRTTYITSF ALLFAFNIGS 120
121 ALAPDINSFI ALRMLCGAAS ASVQSVGAGT VADLYISEDR GKNLSYYYLG PLLAPLLSPI 180
181 FGSLLVNRWP WRSTQWFMVI LSGCNVILLT V
|
|
Region B: Residues: [323-547] |
1 11 21 31 41 51
| | | | | |
1 EDETDRIENQ VATLSTEKHN YVGEVRDQDS LDLESHSSPN TYDGRAGETQ LQRIYTEASR 60
61 SLYEYQLDDS GIDATTAQVT RIRSTDPKLA RSIRENSLRK LQTNLEEQVK KVLSSNGGEI 120
121 APKQVSAVRK VWDTFFVYFI KPLKSLHFLE YPPVALAITF SAISFSTVYF VNMTVEYKYS 180
181 RPPYNFKPLY IGLLYIPNSV TYFFASIYGG RWVDMLLKRY KEKYG
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1ja5A_ |
| Description: | No description for 1ja5A_ was found. |
|
Region A: Residues: [282-322] |
1 11 21 31 41 51
| | | | | |
1 LLPETLRKQD SKGAIAQILA ERRIQVDNNE RGEIQEDYQR G
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1ja5A_ |
| Description: | No description for 1ja5A_ was found. |
|
Region A: Residues: [548-689] |
1 11 21 31 41 51
| | | | | |
1 ILAPEARISW NVVTSVISFP IALLIFGWCL DKKCHWVTPL IGTALFGYAA MMTIGATLSY 60
61 LVDSLPGKGA TGVALNNLIR QILAATAVFV TTPMLNGMGT GWAFTMLAFI VLGASSVLII 120
121 LKKHGDYWRE NYDLQKLYDK ID
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.669 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.659 | a.19.1 | Fertilization protein |
| View | Download | 0.657 | a.24.3 | Cytochromes |
| View | Download | 0.647 | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.638 | a.25.1 | Ferritin-like |
| View | Download | 0.638 | a.26.1 | 4-helical cytokines |
| View | Download | 0.625 | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.618 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.611 | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.594 | a.47.2 | t-snare proteins |
| View | Download | 0.587 | a.7.8 | GAT domain |
| View | Download | 0.579 | a.7.4 | Smac/diablo |
| View | Download | 0.577 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.575 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.574 | a.22.1 | Histone-fold |
| View | Download | 0.573 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.573 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.570 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.565 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.549 | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.541 | a.24.3 | Cytochromes |
| View | Download | 0.538 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.523 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.513 | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.505 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.501 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.497 | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.484 | a.19.1 | Fertilization protein |
| View | Download | 0.483 | d.173.1 | Methionine synthase activation domain-like |
| View | Download | 0.475 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.472 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.465 | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.452 | a.24.1 | Apolipoprotein |
| View | Download | 0.449 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.449 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.439 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.438 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.430 | a.22.1 | Histone-fold |
| View | Download | 0.390 | a.118.1 | ARM repeat |
| View | Download | 0.377 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.376 | a.63.1 | Apolipophorin-III |
| View | Download | 0.375 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.374 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.371 | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.370 | a.167.1 | Porin chaperone SurA, peptide-binding domain |
| View | Download | 0.368 | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.360 | a.25.1 | Ferritin-like |
| View | Download | 0.349 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.324 | a.47.2 | t-snare proteins |
| View | Download | 0.323 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.319 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.315 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.314 | a.1.1 | Globin-like |
| View | Download | 0.311 | a.26.1 | 4-helical cytokines |
| View | Download | 0.310 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.302 | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.302 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.293 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.293 | a.74.1 | Cyclin-like |
| View | Download | 0.285 | c.23.5 | Flavoproteins |
| View | Download | 0.282 | d.91.1 | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
| View | Download | 0.275 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.269 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.264 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.262 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.260 | a.26.1 | 4-helical cytokines |
| View | Download | 0.254 | a.7.7 | BAG domain |
| View | Download | 0.249 | a.26.1 | 4-helical cytokines |
| View | Download | 0.249 | a.47.2 | t-snare proteins |
| View | Download | 0.248 | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.248 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.247 | a.26.1 | 4-helical cytokines |
| View | Download | 0.245 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.245 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.241 | a.128.1 | Terpenoid synthases |
| View | Download | 0.238 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.236 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.236 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.233 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.232 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.226 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.224 | a.7.1 | Spectrin repeat |
| View | Download | 0.224 | a.1.1 | Globin-like |
| View | Download | 0.221 | a.74.1 | Cyclin-like |
| View | Download | 0.214 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.214 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.212 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.211 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.210 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.209 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.206 | c.95.1 | Thiolase-like |
| View | Download | 0.205 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.204 | a.1.1 | Globin-like |
| View | Download | 0.203 | a.48.2 | Transferrin receptor ectodomain, C-terminal domain |
