Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR028C.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..525] | [1..525] |
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0.0 | [9..518] | [285..730] |
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0.0 | [10..520] | [281..736] |
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0.0 | [10..519] | [105..547] |
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0.0 | [10..520] | [281..736] |
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0.0 | [10..520] | [281..735] |
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0.0 | [10..520] | [281..735] |
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0.0 | [10..520] | [281..736] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MIFSLDEELH RVSLDDKKND IKVDYSSAIY NDINHEQGSS ITYEESINHL SVHSNAIPLN 60
61 GMSPAHRMRR RSSAYSKFPI LTPPNTRRF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.457 | b.55.1 | PH domain-like |
| View | Download | 0.644 | d.58.12 | eEF-1beta-like |
| View | Download | 0.644 | d.58.12 | eEF-1beta-like |
| View | Download | 0.464 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.464 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.458 | g.10.1 | Hairpin loop containing domain-like |
| View | Download | 0.458 | g.10.1 | Hairpin loop containing domain-like |
| View | Download | 0.457 | b.55.1 | PH domain-like |
| View | Download | 0.451 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.451 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.418 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.409 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.405 | b.15.1 | HSP20-like chaperones |
| View | Download | 0.401 | a.39.1 | EF-hand |
| View | Download | 0.383 | b.84.1 | Single hybrid motif |
| View | Download | 0.377 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.367 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.357 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.356 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.353 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.347 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.344 | d.101.1 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| View | Download | 0.340 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.328 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.322 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.318 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.313 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.304 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.294 | b.1.1 | Immunoglobulin |
| View | Download | 0.283 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.259 | d.202.1 | Transcription factor NusA, N-terminal domain |
| View | Download | 0.256 | d.235.1 | Hypothetical protein Yhr087W |
| View | Download | 0.253 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.243 | d.58.5 | GlnB-like |
| View | Download | 0.243 | d.206.1 | YggU-like |
| View | Download | 0.242 | d.201.1 | SRP19 |
| View | Download | 0.236 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.229 | a.1.1 | Globin-like |
| View | Download | 0.225 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.225 | d.58.17 | Metal-binding domain |
| View | Download | 0.221 | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.205 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.204 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.202 | a.138.1 | Multiheme cytochromes |
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Region A: Residues: [90-119] |
1 11 21 31 41 51
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1 SITGSDAMRT NTNRLSITPQ DIISSNIGEN
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Region B: Residues: [198-217] |
1 11 21 31 41 51
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1 RTFAERSILS EIEHPNIVKL
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Region C: Residues: [233-478] |
1 11 21 31 41 51
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1 YIPGGELFYH LKEHGTLDET TVSFYAAEIS CALRFLHTKG VVYRDLKPEN CLLNQRGHLV 60
61 LTDFGLSKKS ANDSAVDEED PENVNALYSI IGTPEYCAPE ILLGKAYSQN CDWYSLGCLL 120
121 YDMLVGKPPY TGSNHKVIIN KIQQNKQGPK IPFYLSEGMK DILNALLKKE TAKRWNVDKY 180
181 WAKTGANNKP TKSKKKKSGA ARTSLFTEHF IFRKIDWKLL ESGQLQKTTL GPIVPVITDL 240
241 ELAENF
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| Detection Method: | |
| Confidence: | 618.9897 |
| Match: | 1ctpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [120-197] |
1 11 21 31 41 51
| | | | | |
1 ELSRNLHDFK PVRVLGQGAY GKVLLVKDVN TSKLYAMKQL RKAEILISQT ATDSKREDED 60
61 KNDGNNNDND DGLSKRLE
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Region B: Residues: [218-232] |
1 11 21 31 41 51
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1 FYSFHDNSKL YLLLQ
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Region C: Residues: [479-525] |
1 11 21 31 41 51
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1 DTEFTSMSYE ETYTDSKPIN INSVSKSPDM FKGFSYKASG SYLEKYF
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| Detection Method: | |
| Confidence: | 618.9897 |
| Match: | 1ctpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
| Matching Structure (courtesy of the PDB): |
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