| Protein: | SRO77 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1010 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRO77.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1010] | [1..1010] |
|
|
0.0 | [2..1008] | [4..999] |
|
|
0.0 | [1..638] | [859..1450] |
|
|
0.0 | [1..582] | [790..1317] |
|
Region A: Residues: [1-301] |
1 11 21 31 41 51
| | | | | |
1 MFKKSRHLKN VSNAIKSARV HDVSNGINSK FFDTKKICTY GINGRITVTT FDYTQSLLAV 60
61 ATTAGEIHVY GQKQIEVVFT LKNRPQIKHM RFIKGIYLIA VDEKSNIIVL SVHSKQILTT 120
121 VFCPNSITCF ETDPPLDWML IGLESGSILI YDVDRNQMSK LKIENFQKSV FLPKERLSPV 180
181 ISIQWNPRDI GTILISYEHI TVIYSFIDYK VKQHFFYQLE PYAPGGDLST NIEKKRTPKV 240
241 IQSLYHPNSL HILTVHEDNA LVFWDVNSGK LIHARSIFET HVNFPNPALK DCSFTETPAI 300
301 F
|
| Detection Method: |  |
| Confidence: | 61.0 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [302-471] |
1 11 21 31 41 51
| | | | | |
1 KVSWLCQRNP EYTSLLIATK ATENPCLPQE ITMIDLGGTP MYSVTSFDAM SKYYAKPVQQ 60
61 KLFSLIGKAP LINFLPLPKA SPYFGGCHDT NLILLLLEDG ELETLIYPAG SFSSKASIFP 120
121 RSLAWVRPTV TTCIAQSVQK NLWLGMMTIA QSESFLKGGI PATRNIRRHE
|
| Detection Method: | |
| Confidence: | 2.39794 |
| Match: | 1c5kA_ |
| Description: | TolB, C-terminal domain; TolB, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [472-716] |
1 11 21 31 41 51
| | | | | |
1 TRSALLTGHS NGSVRIWDAS HSEVTDNAVF EVNTAKVLNR ATNLAIKNIS FASETLELAV 60
61 SSEVGDVILF KFETNKFYGQ LPKSDALQLK FSRFSLDDSK TILVDVSDRG PTNVKQGFIP 120
121 STVIHAKKGA VSAIMNSNIG FVAVGFIEGT LIILDRRGPA IIFNENIRVI SKAGSSYVST 180
181 VHFCVMEYGD DGFSSILMLC GTDIGELMTF KILPATNGRF EVKFTDATKT NNQGKILGIN 240
241 SFAKD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [717-1010] |
1 11 21 31 41 51
| | | | | |
1 TGYSCSATIS KMQGLSKGIA IPGFVTISGA NDIRLVSPGK SKDTHALFKY PIATSGLSFI 60
61 PIIDGKGERK LSTIMIVLLI NGDIKVLTVP ELKEVKNLRC PVPLSAQYVE NSSILENVDI 120
121 VIRTGKFQAS LISVLNESAT GSNHTADISQ HTPIDTLYNP DLKIGYRPQV NSLQWARGTI 180
181 YCTPYQLDEL LGGIERPESK YEESAIARGC ISSSSSNAAR KLPPGTKDHR YARPVRSSGR 240
241 SNGYGVLKSV SRAIETRLDT VETTINDYAT TMGQTMNDAM EETGRDMMKS AVGF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
