| Protein: | PRP45 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 379 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRP45.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..379] | [1..379] |
|
|
0.0 | [3..368] | [83..497] |
|
|
0.0 | [1..312] | [1..312] |
|
|
0.0 | [3..369] | [86..509] |
|
|
0.0 | [5..372] | [93..555] |
|
|
0.0 | [4..371] | [89..541] |
|
|
2.0E-99 | [3..372] | [92..526] |
|
|
5.0E-78 | [119..368] | [1..294] |
|
|
3.0E-70 | [7..255] | [113..358] |
|
Region A: Residues: [1-57] |
1 11 21 31 41 51
| | | | | |
1 MFSNRLPPPK HSQGRVSTAL SSDRVEPAIL TDQIAKNVKL DDFIPKRQSN FELSVPL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [58-312] |
1 11 21 31 41 51
| | | | | |
1 PTKAEIQECT ARTKSYIQRL VNAKLANSNN RASSRYVTET HQAPANLLLN NSHHIEVVSK 60
61 QMDPLLPRFV GKKARKVVAP TENDEVVPVL HMDGSNDRGE ADPNEWKIPA AVSNWKNPNG 120
121 YTVALERRVG KALDNENNTI NDGFMKLSEA LENADKKARQ EIRSKMELKR LAMEQEMLAK 180
181 ESKLKELSQR ARYHNGTPQT GAIVKPKKQT STVARLKELA YSQGRDVSEK IILGAAKRSE 240
241 QPDLQYDSRF FTRGA
|
| Detection Method: | |
| Confidence: | 109.853872 |
| Match: | PF02731 |
| Description: | SKIP/SNW domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [313-379] |
1 11 21 31 41 51
| | | | | |
1 NASAKRHEDQ VYDNPLFVQQ DIESIYKTNY EKLDEAVNVK SEGASGSHGP IQFTKAESDD 60
61 KSDNYGA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.59005615358803 | bayes_pls_golite062009 |
| protein binding | 2.41769888237582 | bayes_pls_golite062009 |
| tubulin binding | 0.684160753873506 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.538779930266561 | bayes_pls_golite062009 |
|
Region A: Residues: [298-379] |
1 11 21 31 41 51
| | | | | |
1 QPDLQYDSRF FTRGANASAK RHEDQVYDNP LFVQQDIESI YKTNYEKLDE AVNVKSEGAS 60
61 GSHGPIQFTK AESDDKSDNY GA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
