| Protein: | EFB1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 206 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EFB1.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-75 | [1..206] | [1..225] |
|
|
7.0E-74 | [1..206] | [1..225] |
|
|
9.0E-74 | [1..206] | [1..225] |
|
|
9.0E-74 | [1..206] | [1..225] |
|
|
2.0E-72 | [1..206] | [1..225] |
|
|
2.0E-71 | [1..206] | [1..227] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MASTDFSKIE TLKQLNASLA DKSYIEGTAV SQADVTVFKA FQSAYPEFSR WFNHIASKAD 60
61 EFDSFPAASA AAAEEEEDDD VDLFGSD
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 1jlvA_ |
| Description: | Class delta GST |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.65945313523198 | bayes_pls_golite062009 |
| binding | 1.45526122320486 | bayes_pls_golite062009 |
| transferase activity | 1.05573069897577 | bayes_pls_golite062009 |
| catalytic activity | 0.963623964325467 | bayes_pls_golite062009 |
| receptor binding | 0.490857233487879 | bayes_pls_golite062009 |
| nucleic acid binding | 0.46030380837916 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 0.44372379417457 | bayes_pls_golite062009 |
| transcription regulator activity | 0.385619646192102 | bayes_pls_golite062009 |
| RNA binding | 0.382017633056715 | bayes_pls_golite062009 |
| peptide binding | 0.22963019108532 | bayes_pls_golite062009 |
| glutathione transferase activity | 0.20688408808374 | bayes_pls_golite062009 |
| DNA binding | 0.175092771820973 | bayes_pls_golite062009 |
|
Region A: Residues: [88-206] |
1 11 21 31 41 51
| | | | | |
1 DEEADAEAEK LKAERIAAYN AKKAAKPAKP AAKSIVTLDV KPWDDETNLE EMVANVKAIE 60
61 MEGLTWGAHQ FIPIGFGIKK LQINCVVEDD KVSLDDLQQS IEEDEDHVQS TDIAAMQKL
|
| Detection Method: | |
| Confidence: | 464.741366 |
| Match: | 1f60B_ |
| Description: | Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation elongation factor activity | 12.3173391557088 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 7.81664120156021 | bayes_pls_golite062009 |
| translation regulator activity | 7.77673515271111 | bayes_pls_golite062009 |
| binding | 2.83703195704118 | bayes_pls_golite062009 |
| nucleic acid binding | 2.61354904861592 | bayes_pls_golite062009 |
| actin binding | 1.90340345597574 | bayes_pls_golite062009 |
| protein binding | 1.74079757896683 | bayes_pls_golite062009 |
| signal transducer activity | 1.65423237700268 | bayes_pls_golite062009 |
| molecular transducer activity | 1.65423237700268 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.63487486759233 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.669814437561164 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.651746786837234 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.555069882515023 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.260738180200771 | bayes_pls_golite062009 |
| actin monomer binding | 0.2298282502586 | bayes_pls_golite062009 |
