| Protein: | abts-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 737 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for abts-2.
| Description | E-value | Query Range |
Subject Range |
|
|
497.0 | [0..8] | [734..155] |
|
Region A: Residues: [1-253] |
1 11 21 31 41 51
| | | | | |
1 MPELLCRTER VEHARNFKTE VRGLMDVDHL IERACIHRNM NHSHIHTILL SLFSDLSSRF 60
61 PQEKFDLALF KNAVFSVSDR DSRAPRLHHK LQSYSGTDFF DVNQTWIVTY AQLDGLKQSH 120
121 MALATLEDAT NLGLEMEEAR TVVLILSPSY EKHTKSAAEI ARTFATLLMN DTLRQSVNDA 180
181 ADDDQLRDLL TEYAKGLSQQ LTIQVNGKPI ADDDDEYESK NSSFCPYYPF RGLVKDFKRR 240
241 MANYKSDYLD GIK
|
| Detection Method: |  |
| Confidence: | 31.69897 |
| Match: | 1hynP |
| Description: | Erythrocite membrane Band 3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion transmembrane transporter activity | 5.53342374278862 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.52089460336827 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 5.05984221151516 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.53671418417138 | bayes_pls_golite062009 |
| transporter activity | 3.71632554122909 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.65156575316092 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.6328272808612 | bayes_pls_golite062009 |
| bicarbonate transmembrane transporter activity | 3.47798360646642 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 3.1367361209641 | bayes_pls_golite062009 |
| chloride transmembrane transporter activity | 2.81610322933515 | bayes_pls_golite062009 |
| anion exchanger activity | 2.81610322933515 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.69943173291914 | bayes_pls_golite062009 |
| sodium:bicarbonate symporter activity | 2.55643394918259 | bayes_pls_golite062009 |
| anion:anion antiporter activity | 2.28054946403665 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.36491414637832 | bayes_pls_golite062009 |
| antiporter activity | 1.16370853401172 | bayes_pls_golite062009 |
| binding | 1.10848568469131 | bayes_pls_golite062009 |
| protein binding | 0.324874109063796 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 0.0141334718769964 | bayes_pls_golite062009 |
|
Region A: Residues: [254-443] |
1 11 21 31 41 51
| | | | | |
1 DRRSVSKVIS TAVFLIFTIL PTSIAYGMLN ENNTNGAINV QKVVLGQWIG SLLFGIFGGQ 60
61 QLLILSTTAP LSIYIAVIYQ VAQTNDWDFF QMYASVGIYA MGLLILASVF QLASLMKFTT 120
121 RSTEEIFSVF IALALIIKAI MAIVHVYTHG YLGCINNVAG DLCDPAEPLL FIFLLFGTTW 180
181 LSMTIISFRS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [444-534] |
1 11 21 31 41 51
| | | | | |
1 SPYLSRWKRD LVSDYALPIA VLVFSFISFF GFSDVKKEQF QIFSRETDAF FVPFFNLPAE 60
61 AQLPAVGLAI PLSILFFMDQ LLVTNTVDNK D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [535-627] |
1 11 21 31 41 51
| | | | | |
1 NKLKKGSAHH WDLLVVGVLN IGLSIFGLPW MHGALPSAYL HLKALSDVED RLHNGYIQTV 60
61 IVHVRETRLA TLIAHIIMIP IYFFLVPHIT VFI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [628-737] |
1 11 21 31 41 51
| | | | | |
1 PTSIFNGVFL FMAFSSLTGN EFWERILLIF TEQRAYPPTH YIRRVPQRVV HQFTIIEFIQ 60
61 LVILVAIGFA QYHYVEMVFP IVIAAFIPFR HFFLPLFIRK QYLEAIDGQH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
