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View Structure Prediction Details

Protein: gi|222619055, gi...
Organism: Oryza sativa Japonica Group
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222619055, gi....

Description E-value Query
Range
Subject
Range
gi|16226442 - gi|16226442|gb|AAL16169.1|AF428401_1 At1g80380/F5I6_13 [Arabidopsis thaliana]
213.0 [0..57] [412..94]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLHAAPHH AAAAAAVVSS PSSAPLLLRA KPYHPKAAAC SFTVTATTPS RKAFLSCPDH  60
   61 GQAAAGAAPP RSAPASSPAL ISSVQDLYDF ICSGPLVDRI GYTKEKIAGS IDRWLRCGVQ 120
  121 VARLFRLNEL HLSEAEKARI YHFYIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 2qy9A
Description: No description for 2qy9A was found.

Predicted Domain #2
Region A:
Residues: [147-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VFLWCEDQVT EHRAKYKDGD EIPPLVIGVS APQGSGKTTL VFALDYLFRV AGRNAATLSI  60
   61 DDFYLTAAEQ GKLRERNPGN ALLELRGNAG SHDLPFSVET LESLLKLTKE GLKMKLPRYD 120
  121 KSAFGGRGDR ADPSTWPEVE GPLEVVLFEG WMLGFKPLPN EVVKAVDPQL EVVNKNLEAY 180
  181 YDAWDRFIGS WMVIKIKEPS CVYQWRLQAE IAMRADGKPG MSDEEVMDFV SRYLPAYHAY 240
  241 LPTLYKEGPN GSNPDHLLVV DIDEKRNPMW GR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.154902
Match: 1odfA
Description: Structure of YGR205w protein.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.26687146372087 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.420384345567397 bayes_pls_golite062009
pyrophosphatase activity 0.411077559082206 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.399864241228259 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.398496265411009 bayes_pls_golite062009
catalytic activity 0.234613562021476 bayes_pls_golite062009
hydrolase activity 0.216831145240405 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle