| Protein: | NAT1-PC |
| Organism: | Drosophila melanogaster |
| Length: | 1526 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT1-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
957.0 | [0..609] | [1526..1] |
|
Region A: Residues: [1-548] |
1 11 21 31 41 51
| | | | | |
1 DPDPQKTGKP TKTPRVAHSV PPKHAPISPP SRSRKASTIP LSTYDAAPLL HSYDDSPQRW 60
61 SGVTNGHQAG VIIDQFRGGK AIIIEGGTST GDTKSIGGGS DLRLVITANP SEIERNYEQP 120
121 TNRGGGGGGG VIGVSCGGQT PPTPSVGKTL LNTSPNLLPI TTATDTFNNL KNLVKIDKGS 180
181 SPSSGSNSLG GNYRKGGSNG SGYKSAGGNG GSPAISGNSE GGRNGSRSSG GPTGHFSTGY 240
241 SKNSVKIRQH DSEVSPRPRR SYQGDSSSSR YYPKNSDILG QGLGGNSDSY NGSSSSGRYQ 300
301 QQDQQGGSHR GSRSNYHSNS DGSYNRSINS NSVGGGGSGA VGSGSGGSNY RSARNYENGN 360
361 GSNGTQPRYG SGNGNGNSSN SNSSSGYNGS AASSTNSKSS YGASRGGNDG GVSSGYSSNY 420
421 RDNYEDSPSH QRYNNTNSLE RNGGGGSGAG ASGGPRSYGR SDADRYGGTP SSRTPNLRNG 480
481 SASAQISGST SNSSNISLNS GSASAAGGGT PHSQQQQERS QAGKASTPPP ITGRWIPPSL 540
541 RPQHGLTQ
|
| Detection Method: |  |
| Confidence: | 23.39794 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [549-882] |
1 11 21 31 41 51
| | | | | |
1 SEKNDAVFRR VRGILNKLTP EKFQELSDEL LKLDLNSIAI LKGVILLIFD KALDEPKYSS 60
61 MYAQLCKRLS EEAPSFDKEP SNSSTFLRLL IAVCRDKFNN RLKRDENDNR PPPENEADEE 120
121 ERRHLAKQRM LGNVKFIGEL NKLDMLSKNV LHQCIMELFD KKKKRTAGTQ EMCEDMECLA 180
181 QLLKTCGKNL DSEQGKELMN QYFEKLERRS KSSEYPPRIR FMLKDVIELR QNNWVPRKLG 240
241 TTEGPVPIKQ IRSDDDSIIR TPFPNRNRDM RNNDRDSDSW MNRFHLNIQP GGYNDMFSGL 300
301 SVTGASPIVS PFATSNRDRD RDNRQYNNRG DRNR
|
| Detection Method: | |
| Confidence: | 102.0 |
| Match: | 1hu3A |
| Description: | Eukaryotic initiation factor eIF4G |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA cap binding | 3.2160251815809 | bayes_pls_golite062009 |
| binding | 1.99013774955562 | bayes_pls_golite062009 |
| protein binding | 1.75981610748679 | bayes_pls_golite062009 |
|
Region A: Residues: [883-969] |
1 11 21 31 41 51
| | | | | |
1 DRDQGGSGGA NYGNRYNKHN QNGGGSGGGS SNNRDRDDSR RNNDRDRDRN DGQYGGNQLL 60
61 GSKELAPRFK RNLITTNQDA VENLQMR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [970-1163] |
1 11 21 31 41 51
| | | | | |
1 PAANSLLFRA ASQNQKFPAT LPMSTPPNSS GSNNQGSSQG QLSNSHYPML GTPTSHLINP 60
61 TRPSSTPSAE YADNRTLLGV QQERGLKATS SSPNFSSGAE KLDLDGQAGR KGSHDGKDQG 120
121 KNGSVERPST PAGGIGSAKQ QKKDKGPNKE ELSKKASQYF KDRFYYDEEE DAEVTEIEIK 180
181 DIDETKTEEA DAAP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1164-1526] |
1 11 21 31 41 51
| | | | | |
1 VEVSEVKEDA AIPVTTPDRF TKLVDGFLEL KLPEKALKDV CINLLMEVLD RVNDVFLERA 60
61 VRLLQTLRKQ SNIKPNIVVE IFKQVVNKMN EREALNPRIV SLVASLLAKT ICEPALLKLS 120
121 DIANFTDNGQ HYPLFLLVLQ QLVKVIGKDA LEEKFRASKV DLMNSLPEAD RNKERLAGIL 180
181 EDRKLSFLYP LLKVQAEMLK QLQSDPNPNN FYKWIKANVD NKYYKDPGFI QALMTVVVKY 240
241 VTKETTLADN LDPKEHPEKS VTQKEQQLLE NYSQMLQTFL GQNELQLMAL YALQTFCYNE 300
301 NFPKGMLCRW FKYLYESEII EEEAFVLWKE EISDKYPGKG SALFQVNAWL TWLQEAESED 360
361 DED
|
| Detection Method: | |
| Confidence: | 124.0 |
| Match: | 1ug3A |
| Description: | C-terminal portion of human eIF4GI |
Matching Structure (courtesy of the PDB): |
|
