| Protein: | gi|60656185, gi|... |
| Organism: | synthetic construct |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|60656185, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-98 | [1..340] | [14..364] |
|
|
2.0E-96 | [1..339] | [1..338] |
|
|
3.0E-96 | [1..340] | [1..339] |
|
|
4.0E-96 | [1..340] | [1..340] |
|
|
1.0E-90 | [8..340] | [7..339] |
|
|
2.0E-86 | [16..339] | [10..333] |
|
|
6.0E-74 | [24..336] | [9..353] |
|
|
3.0E-71 | [3..332] | [45..363] |
|
|
6.0E-71 | [27..328] | [1..297] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MLEAPGPSDG CELSNPSASR VSCAGQMLEV QPGLYFGGAA AVAEPDHLRE AGITAVLTVD 60
61 SEEPSFKAGP GVEDLWRLFV PALDKPETDL LSHLDRCVAF IGQARAEGRA VLVHCHAGVS 120
121 RSVAIITAFL MKTDQLPFEK AYEKLQILKP EAKMNEGFEW QLKLYQAMGY EVDTSSAIYK 180
181 QYRLQKVT
|
| Detection Method: |  |
| Confidence: | 34.09691 |
| Match: | 2esbA |
| Description: | No description for 2esbA was found. |
|
Region A: Residues: [189-340] |
1 11 21 31 41 51
| | | | | |
1 EKYPELQNLP QELFAVDPTT VSQGLKDEVL YKCRKCRRSL FRSSSILDHR EGSGPIAFAH 60
61 KRMTPSSMLT TGRQAQCTSY FIEPVQWMES ALLGVMDGQL LCPKCSAKLG SFNWYGEQCS 120
121 CGRWITPAFQ IHKNRVDEMK ILPVLGSQTG KI
|
| Detection Method: | |
| Confidence: | 0.96 |
| Match: | 1fwqA |
| Description: | RabGEF Mss4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.23990229861779 | bayes_pls_golite062009 |
| transcription regulator activity | 1.56736668601469 | bayes_pls_golite062009 |
| nucleic acid binding | 1.50544093113513 | bayes_pls_golite062009 |
| protein binding | 1.39372124332883 | bayes_pls_golite062009 |
| DNA binding | 1.36261752067677 | bayes_pls_golite062009 |
| transcription factor activity | 0.740498532141188 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors | 0.5862355007488 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.559474334946226 | bayes_pls_golite062009 |
| catalytic activity | 0.551815283886794 | bayes_pls_golite062009 |
| cation binding | 0.241588214026724 | bayes_pls_golite062009 |
| metal ion binding | 0.241588214026724 | bayes_pls_golite062009 |
| transition metal ion binding | 0.241190045569659 | bayes_pls_golite062009 |
| ion binding | 0.235349833568887 | bayes_pls_golite062009 |
| protein-methionine-R-oxide reductase activity | 0.20684073772143 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.0721666227707192 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.0585849323980822 | bayes_pls_golite062009 |
