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View Structure Prediction Details

Protein: gi|71909967, gi|...
Organism: Streptococcus pyogenes MGAS5005
Length: 234 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|71909967, gi|....

Description E-value Query
Range
Subject
Range
gi|19747447, gi|... - gi|19747447|gb|AAL96979.1| putative L-ribulose 5-phosphate [Streptococcus pyogenes MGAS8232], gi|197...
259.0 [0..1] [234..22]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLQEMRE RVCAANKSLP QHGLVKFTWG NVSEVCRELG RIVIKPSGVD YDLLTPENMV  60
   61 VTDLDGNVVE GDLNPSSDLP THVELYKAWP EVGGIVHTHS TEAVGWAQAG RDIPFYGTTH 120
  121 ADYFYGPVPC ARSLTKAEVD GAYEQETGNV ILEEFSKRGL DPMAVPGIVV RNHGPFTWGK 180
  181 TPEQAVYHSV VLEEVARMNR LTEQINPRVE PAPRYIMDKH YLRKHGPNAY YGQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.221849
Match: 1jdiA
Description: L-ribulose-5-phosphate 4-epimerase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
L-ribulose-phosphate 4-epimerase activity 3.50507333471987 bayes_pls_golite062009
L-fuculose-phosphate aldolase activity 2.43949811564444 bayes_pls_golite062009
catalytic activity 1.9511172460719 bayes_pls_golite062009
aldehyde-lyase activity 1.08084403816388 bayes_pls_golite062009
lyase activity 0.77829514510632 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 0.42493443904865 bayes_pls_golite062009
carbon-carbon lyase activity 0.2178091782272 bayes_pls_golite062009
racemase and epimerase activity 0.15063402811264 bayes_pls_golite062009
isomerase activity 0.0458367676418101 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle