| Protein: | D2R-PE |
| Organism: | Drosophila melanogaster |
| Length: | 572 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for D2R-PE.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..67] | [572..1] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MLGGFGDAEL LQRTATVARE TLGNRTAPST TSYDGGGSGD VGVAGGLAGT AGGGVGGAGG 60
61 SGGSTFMLLL ENFNDYFPNY NGSTVSGTST IAPGVAITGS RGSGLLLEQN LTGLYLD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-413] |
1 11 21 31 41 51
| | | | | |
1 GYRLNCTNET LNLTDSCGEL RVVDHNYWAL ILILFPILTL FGNILVILSV CRERSLQTVT 60
61 NYFIVSLAIA DLLVAVVVMP FAVYFLVNGA WALPDVVCDF YIAMDVICST SSIFNLVAIS 120
121 IDRYIAVTQP IKYAKHKNSR RVCLTILLVW AISAAIGSPI VLGLNNTPNR EPDVCAFYNA 180
181 DFILYSSLSS FYIPCIIMVF LYWNIFKALR SRARKQRAAR KPHLSELTGG SVIENIAQTR 240
241 RLAETALDSS RHASRILPDE AATNTASGSN EEEDENAISP DIDDCHVIVN DKSTEF
|
| Detection Method: | |
| Confidence: | 35.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [414-572] |
1 11 21 31 41 51
| | | | | |
1 MLATVVEETG NVAMKPLSFV RYGVQEAMTL ARNDSTLSTT SKTSSRKDKK NSQASRFTIY 60
61 KVHKASKKKR EKSSAKKERK ATKTLAIVLG VFLFCWLPFF SCNIMDAMCA KFKKDCRPGL 120
121 TAYMMTTWLG YINSFVNPVI YTIFNPEFRK AFKKIMHMG
|
| Detection Method: | |
| Confidence: | 5.66 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
