| Protein: | CE39492 |
| Organism: | Caenorhabditis elegans |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39492.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..2] | [365..189] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MTGKLYGNKD NFRTQKVLIA AKLANKTVTL AGDAAPADKF PLGVTPAFEG DALLFGAESI 60
61 GLHLTGTSAN AETVQWLQFA EGYLLPAVLG YVLPSVSAAN FDKKTVEQYK NELNGQLQYV 120
121 LDANARKSIV NVTRWFRTVV NQPAVKEVLG EVSLASSVAQ FNQAKFTELS AKVAKSAPKA 180
181 EKPKKEAKPA AAAAQPEDD
|
| Detection Method: |  |
| Confidence: | 34.0 |
| Match: | 1aw9A |
| Description: | STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
| binding | 0.630214408223227 | bayes_pls_golite062009 |
| nucleic acid binding | 0.46030380837916 | bayes_pls_golite062009 |
| RNA binding | 0.382017633056715 | bayes_pls_golite062009 |
| transcription regulator activity | 0.364698672137451 | bayes_pls_golite062009 |
| DNA binding | 0.175092771820973 | bayes_pls_golite062009 |
| protein binding | 0.034515546627104 | bayes_pls_golite062009 |
| 0.0102370745096865 | bayes_pls_golite062009 |
|
Region A: Residues: [200-365] |
1 11 21 31 41 51
| | | | | |
1 EPKEEKSKDP FQDMPKGTFV LDNFKRSYSN EDTATKAIPH FWENFDADNW SIWKCEYKYP 60
61 EDLTLAFMSC NLINGMYQRL EKLKKNAFAS MILFGTDNNS TISGIWVWKG DKLAFELSPD 120
121 WQVDYESYTW TKLDAKSDAT KKEVNEYLMW EGDFGGKKFN QGKIFK
|
| Detection Method: | |
| Confidence: | 70.09691 |
| Match: | 1pbuA |
| Description: | Elongation factor 1-gamma C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation elongation factor activity | 11.9602302019768 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 7.4644014407268 | bayes_pls_golite062009 |
| translation regulator activity | 7.42485540728491 | bayes_pls_golite062009 |
| binding | 2.40476273878449 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32946003917142 | bayes_pls_golite062009 |
| protein binding | 0.505707524948553 | bayes_pls_golite062009 |
