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View Structure Prediction Details

Protein: che-1
Organism: Caenorhabditis elegans
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for che-1.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
488.0 [0..3] [272..2574]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYHYQMNNN NTDFFDSANY IPQMQMHHGY QDFYASDSTS SMPSSGTTQQ ALQQTENGII  60
   61 QGQNGSDHGA YGGWRQHDWN STSSWSIGNQ LEMENGTLTM SHGATNDGNI RNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [114-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQMMTSNHIT TDSFRQIPPS GLCYMDPTPS LRLPKKEPLP VQRPMARSTP KPFRCQTCGK  60
   61 AFSQAANLTA HKRIHTGEKP FMCPVCNRPF SQSSSLVTHR RTHTGERPYP CAQCEKAFTD 120
  121 SSTLTKHLRT HTGHKPYVCS ICMMKFTQSG NLHRHMKTHK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 2i13A
Description: No description for 2i13A was found.

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