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Protein Overview: che-1

General Information:
Name(s) found: che-1 / CE40380 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00000483 locus:che-1 status:Partially_confirmed UniProt:Q0PCD8 protein_id:CCD68098.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: neuron differentiation [IMP]
    regulation of chemotaxis [IMP]
    positive regulation of transcription from RNA polymerase II promoter [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYHYQMNNN NTDFFDSANY IPQMQMHHGY QDFYASDSTS SMPSSGTTQQ ALQQTENGII  60
   61 QGQNGSDHGA YGGWRQHDWN STSSWSIGNQ LEMENGTLTM SHGATNDGNI RNNQQMMTSN 120
  121 HITTDSFRQI PPSGLCYMDP TPSLRLPKKE PLPVQRPMAR STPKPFRCQT CGKAFSQAAN 180
  181 LTAHKRIHTG EKPFMCPVCN RPFSQSSSLV THRRTHTGER PYPCAQCEKA FTDSSTLTKH 240
  241 LRTHTGHKPY VCSICMMKFT QSGNLHRHMK THK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..273] PSI-BLAST 61.0 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle