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View Structure Prediction Details

Protein: che-1
Organism: Caenorhabditis elegans
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for che-1.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
488.0 [0..3] [272..2574]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYHYQMNNN NTDFFDSANY IPQMQMHHGY QDFYASDSTS SMPSSGTTQQ ALQQTENGII  60
   61 QGQNGSDHGA YGGWRQHDWN STSSWSIGNQ LEMENGTLTM SHGATNDGNI RNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [114-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQMMTSNHIT TDSFRQIPPS GLCYMDPTPS LRLPKKEPLP VQRPMARSTP KPFRCQTCGK  60
   61 AFSQAANLTA HKRIHTGEKP FMCPVCNRPF SQSSSLVTHR RTHTGERPYP CAQCEKAFTD 120
  121 SSTLTKHLRT HTGHKPYVCS ICMMKFTQSG NLHRHMKTHK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 2i13A
Description: No description for 2i13A was found.

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