| Protein: | C3H56_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H56_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
179.0 | [0..5] | [367..11] |
|
|
165.0 | [0..1] | [367..1] |
|
|
162.0 | [0..29] | [358..61] |
|
|
160.0 | [0..29] | [358..101] |
|
|
159.0 | [0..29] | [360..200] |
|
|
159.0 | [0..29] | [358..137] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MDYTNAIHII PDAAGPDAWA NAAAQGGDAG IWATEDDYNS QWNADGGGGG SSRAGSEQPP 60
61 PGKKSRGGGG GEGGGNTSKS RAIGKMF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.515 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.493 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.477 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.468 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.450 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.445 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.426 | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.410 | c.15.1 | BRCT domain |
| View | Download | 0.400 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.373 | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [88-161] |
1 11 21 31 41 51
| | | | | |
1 FKTKLCCKFR AGTCPYVTNC NFAHGMEELR KPPPNWQEIV AAHEEATEAR EEHQIPIMTS 60
61 SGPTAGGDAG CGGG
|
| Detection Method: | |
| Confidence: | 8.30103 |
| Match: | 2d9nA |
| Description: | No description for 2d9nA was found. |
|
Region A: Residues: [162-209] |
1 11 21 31 41 51
| | | | | |
1 GGGGSGRAYK GRHCKKFYTD EGCPYGDACT FLHDEQSKAR ESVAISLS
|
| Detection Method: | |
| Confidence: | 2.54 |
| Match: | 2d9mA |
| Description: | No description for 2d9mA was found. |
|
Region A: Residues: [210-367] |
1 11 21 31 41 51
| | | | | |
1 PSVGGGGGGG SYNSAAAAAA SASAAAGNGP MQKPSNWKTR ICNKWEMTGY CPFGSKCHFA 60
61 HGAAELHKYG GGLVDIDSRD AAATPDSKQA VVSAKAPAET AAASTTVLPH ADVYHLGVQA 120
121 QRSTIAGQRS GQVQRPIQKW KGPDKISRIY GDWIDETE
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 2cqeA |
| Description: | Solution Structure of the Zinc-finger domain in KIAA1064 protein |
Matching Structure (courtesy of the PDB): |
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