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Protein Overview: C3H12_ARATH

General Information:
Name(s) found: C3H12_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: nucleic acid binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHHRRDSGG DVVHVIPTNN PPPDNWFPNL GDSAVWATED DYNRAWAMNP DNTSGDNNGP  60
   61 PNKKTRGSPS SSSATTTSAA SNRTKAIGKM FFKTKLCCKF RAGTCPYITN CNFAHTVEEL 120
  121 RRPPPNWQEI VAAHEEERSG GMGTPTVSVV EIPREEFQIP SLVSSTAESG RSFKGRHCKK 180
  181 FYTEEGCPYG ESCTFLHDEA SRNRESVAIS LGPGGYGSGG GGGSGGGSVG GGGSSSNVVV 240
  241 LGGGGGSGSG SGIQILKPSN WKTRICNKWE ITGYCPFGAK CHFAHGAAEL HRFGGGLVEE 300
  301 EGKDGVSPNP DTKQTVQNPK GLSDTTTLLS PGVPHNADAS YHTGVALQRA SSAVTQKPGI 360
  361 RTHQKWKGPA KISRIYGDWI DDIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.
    2 View Details [79..159] PSI-BLAST 11.221849 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
    3 View Details [160..299] FFAS03 3.76 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
    4 View Details [300..384] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle