YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG31156-PA
Organism: Drosophila melanogaster
Length: 948 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31156-PA.

Description E-value Query
Range
Subject
Range
gi|83745880, gi|... - gi|83745880|ref|ZP_00942937.1| TRANSCRIPTION ACCESSORY PROTEIN (S1 RNA binding domain) [Ralstonia so...
772.0 [0..156] [941..452]

Back

Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRPRRAAS TKKIVIEISD SDEEVNLTAD DDYRPEETKS RIIDRAADAQ TVVTKRQRFP  60
   61 TSKKTAAEGP APKKKRGDKE KADENACPNE NNPESVVQDT PSTSNQRNGA VGTEHNSEAP 120
  121 APKRKRARKD KEDLKTAANE TNPEKGDVVP STAVTQPNDI VASSSHNKSS TGRSSFWERR 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-948]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVWNIDELLA ETESIQPQAA RNIVKLFEDE NTIPFICRYR RDLVDHIAPD RLRDIRNTYT  60
   61 EIVDLRKRAE NIIGKLQREN IMTPEIREEL MCAKSNEELE FLYAPYKPAS KGTLAERAKA 120
  121 LGLQVYADCL LYGSAPKVNL SEIVDRRNEA LATEALVMSG ICQIIIHNIS KNTNVLEEIR 180
  181 RLQNVHRVFL KCSKTKEAKS SKSSSSSKAS SSKGSNQNAD KKLDSSKFEN YFNFQGDVKT 240
  241 IKPYQMLAIN RGEKHKWLSV KIETNDYLKR DLMRYITDQY MNQGLQYPLR REVFTKSLEE 300
  301 CYAKKLQPLM CRQIRAALKE KGTKAAIDVF AKNLKQLLLI SPLKGERILG IDPGFINGCK 360
  361 LALISETADV LYTGVIYPHG AMSNKRAAEQ KLVQLLSDHN CKIIGLGNGT ACRETEHWLT 420
  421 GMFHAGVLDS RIIRYSIVNE NGASIYSCSN VAAKEFPKMD TNERSAVSIA RRLNDPLSEY 480
  481 VKIEPRHLGV GMYQHDVPEK ILTASLNDVV SECVSYVGVD LNTASLSVLK HIAGLSEKKA 540
  541 EKIIEHRTQK GPFKTRKDLL SVRSIGEKSF VQCAGFVRIE PRSVGGQLQN PLDCTWVHPE 600
  601 SYNVVESIVG ECDLKLSDVG KAAFIASIKQ FASSQPNLDR IAKQHKLPME RLEFLLVALQ 660
  661 RELLQDYRAD LDKRPLFKQG LTRLDDLSMG EVVTGAVTNV TQFGAFVDVG VERNGLIHNS 720
  721 NMNNSQLSVG DRIVASVVKV DLKRRQLELR LENMLMETDT SFKFKAED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2oceA
Description: No description for 2oceA was found.

Predicted functions:

Term Confidence Notes
nuclease activity 1.80465910244067 bayes_pls_golite062009
catalytic activity 1.25233849524628 bayes_pls_golite062009
binding 0.976779918085478 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.871378999384944 bayes_pls_golite062009
transcription regulator activity 0.68649942036452 bayes_pls_golite062009
ribonuclease activity 0.567315548679559 bayes_pls_golite062009
exonuclease activity 0.550209133970558 bayes_pls_golite062009
four-way junction helicase activity 0.419570002710614 bayes_pls_golite062009
nucleic acid binding 0.348817191795884 bayes_pls_golite062009
endonuclease activity 0.164428265680495 bayes_pls_golite062009
DNA binding 0.163320242518978 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle