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View Structure Prediction Details

Protein: gi|55249837
Organism: Xenopus laevis
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55249837.

Description E-value Query
Range		 Subject
Range
AKTIP_DANRE - AKT-interacting protein OS=Danio rerio GN=aktip PE=2 SV=1
 295.0 [0..1] [292..1]
gi|76640432, gi|... - gi|76640432|ref|XP_884853.1| PREDICTED: AKT interacting protein isoform 6 [Bos taurus], gi|76640430|...
 284.0 [0..1] [292..1]
ENSPTRT00000014957 - null
AKTIP_MACFA - AKT-interacting protein OS=Macaca fascicularis GN=AKTIP PE=2 SV=1
AKTIP - AKT interacting protein
 284.0 [0..1] [292..1]
AKTIP_RAT - AKT-interacting protein OS=Rattus norvegicus GN=Aktip PE=1 SV=1
 282.0 [0..1] [292..1]
gi|109128509, gi... - gi|109128511|ref|XP_001086041.1| PREDICTED: similar to fused toes homolog isoform 5 [Macaca mulatta]...
 281.0 [0..1] [292..1]
FTS1_PONPY - Fused toes protein homolog - Pongo pygmaeus (Orangutan)
AKTIP_PONAB - AKT-interacting protein OS=Pongo abelii GN=AKTIP PE=2 SV=1
 280.0 [0..1] [292..1]
gi|114662508, gi... - gi|114662512|ref|XP_001166637.1| PREDICTED: fused toes homolog isoform 7 [Pan troglodytes], gi|11466...
gi|208965808 - gi|208965808|dbj|BAG72918.1| AKT interacting protein [synthetic construct]
gi|119603212, gi... - gi|62897045|dbj|BAD96463.1| fused toes homolog [Homo sapiens], gi|119603213|gb|EAW82807.1| fused toe...
 279.0 [0..1] [292..1]

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Predicted Domain #1
Region A:
Residues: [1-292] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPLWSMSAG SVRKRAEGEE KTLAGDVKTS PPRSAPKKQL PSIPKNALPI AKPTSPAPAA  60
   61 QSTNGTHASY GPFYLEYSLL AEFTLVVKQK LPGVYVQPSY RSALVWFGVI FIRHGLYQDG 120
  121 VFKFTVYIPD NYPDGDCPRL LFDIPVFHPL VDPTSGELDV KRAFAKWRRN HNHIWQVLMY 180
  181 ARRVFYKIDT TSPLNPEAAV LYEKDIQLFK SKVVDSVKVC TARLFDQPKI EDPYAISFSP 240
  241 WNPSVHDEAR EKMLTQKKPD EQHNKSVHVA GLSWVKPGSV QPFSKEEKTV AT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.221849
Match: 1i7kA
Description: Ubiquitin conjugating enzyme, UBC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
small conjugating protein ligase activity 3.05738310699461 bayes_pls_golite062009
ubiquitin-protein ligase activity 2.76087475780036 bayes_pls_golite062009
protein binding 1.77678273247394 bayes_pls_golite062009
protein kinase activity 1.71434138094347 bayes_pls_golite062009
acid-amino acid ligase activity 1.47589315166883 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.43119775854149 bayes_pls_golite062009
kinase activity 1.33272335404887 bayes_pls_golite062009
binding 1.11361711056154 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.903446438346022 bayes_pls_golite062009
catalytic activity 0.891402822028799 bayes_pls_golite062009
protein serine/threonine kinase activity 0.847906750898607 bayes_pls_golite062009
ligase activity 0.42456400889624 bayes_pls_golite062009
transferase activity 0.416498237981883 bayes_pls_golite062009
nucleic acid binding 0.359884647278502 bayes_pls_golite062009
DNA binding 0.125877612807025 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.0114094023032139 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle