| Protein: | E2FE_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 403 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for E2FE_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..1] | [378..1] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MSDLSPERFK LAVTSPSSIP ESSSALQLHH SYSRKQKSLG LLCTNFLALY NREGIEMVGL 60
61 DDAASKLGVE RRRIYDIVNV LESVGVLTRR AKNQYTWKGF SAIPGALKEL QEEGVKDTFH 120
121 RFYVNENVKG SDDEDDDEES SQPHSSSQTD SSKPGSL
|
| Detection Method: |  |
| Confidence: | 25.221849 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [158-258] |
1 11 21 31 41 51
| | | | | |
1 PQSSDPSKID NRREKSLGLL TQNFIKLFIC SEAIRIISLD DAAKLLLGDA HNTSIMRTKV 60
61 RRLYDIANVL SSMNLIEKTH TLDSRKPAFK WLGYNGEPTF T
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1cf7B |
| Description: | Cell cycle transcription factor DP-2 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [259-403] |
1 11 21 31 41 51
| | | | | |
1 LSSDLLQLES RKRAFGTDIT NVNVKRSKSS SSSQENATER RLKMKKHSTP ESSYNKSFDV 60
61 HESRHGSRGG YHFGPFAPGT GTYPTAGLED NSRRAFDVEN LDSDYRPSYQ NQVLKDLFSH 120
121 YMDAWKTWFS EVTQENPLPN TSQHR
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2azeB |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
