| Protein: | NFYB8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 173 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFYB8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
183.0 | [0..6] | [171..28] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE 60
61 IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT LGFEDYMEPL KVYLMRYREM 120
121 EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 1n1jA |
| Description: | Nuclear transcription factor Y subunit beta (Nf-Yb3) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 4.24625687315724 | bayes_pls_golite062009 |
| transcription regulator activity | 4.08606081850613 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 4.04353148658823 | bayes_pls_golite062009 |
| nucleic acid binding | 3.93473976418251 | bayes_pls_golite062009 |
| binding | 3.84636641231951 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.38228606466152 | bayes_pls_golite062009 |
| transcription factor activity | 2.31114764804139 | bayes_pls_golite062009 |
| transcription activator activity | 1.25487495162413 | bayes_pls_golite062009 |
| transcription factor binding | 1.15204005455906 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.1297723528047 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.01502031330902 | bayes_pls_golite062009 |
| protein binding | 0.978906971260821 | bayes_pls_golite062009 |
| transcription repressor activity | 0.72554769377984 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.0945459819298291 | bayes_pls_golite062009 |
