| Protein: | SYEC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 719 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYEC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
540.0 | [0..1] | [719..1] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MDGMKLSFPP ESPPLSVIVA LSLSASPVTI DSSAAATTVP SFVFSDGRKL NGATVLLRYV 60
61 GRSAKKLPDF YGNNAFDSSQ IDEWVDYASV FSSGSEFENA CGRVDKYLES STFLVGHSLS 120
121 IADVAIWSAL AGTGQRWESL RKSKKYQSLV RWFNSILDEY SEVLNKVLAT Y
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 2gdrA |
| Description: | No description for 2gdrA was found. |
|
Region A: Residues: [172-719] |
1 11 21 31 41 51
| | | | | |
1 VKKGSGKPVA APKSKDSQQA VKGDGQDKGK PEVDLPEAEI GKVKLRFAPE PSGYLHIGHA 60
61 KAALLNKYFA ERYQGEVIVR FDDTNPAKES NEFVDNLVKD IGTLGIKYEK VTYTSDYFPE 120
121 LMDMAEKLMR EGKAYVDDTP REQMQKERMD GIDSKCRNHS VEENLKLWKE MIAGSERGLQ 180
181 CCVRGKFNMQ DPNKAMRDPV YYRCNPMSHH RIGDKYKIYP TYDFACPFVD SLEGITHALR 240
241 SSEYHDRNAQ YFKVLEDMGL RQVQLYEFSR LNLVFTLLSK RKLLWFVQTG LVDGWDDPRF 300
301 PTVQGIVRRG LKIEALIQFI LEQGASKNLN LMEWDKLWSI NKRIIDPVCP RHTAVVAERR 360
361 VLFTLTDGPD EPFVRMIPKH KKFEGAGEKA TTFTKSIWLE EADASAISVG EEVTLMDWGN 420
421 AIVKEITKDE EGRVTALSGV LNLQGSVKTT KLKLTWLPDT NELVNLTLTE FDYLITKKKL 480
481 EDDDEVADFV NPNTKKETLA LGDSNMRNLK CGDVIQLERK GYFRCDVPFV KSSKPIVLFS 540
541 IPDGRAAK
|
| Detection Method: | |
| Confidence: | 149.0 |
| Match: | 1gsgP |
| Description: | Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain; Glutaminyl-tRNA synthetase (GlnRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 5.13420185144914 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.61484562096458 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 4.45248364270113 | bayes_pls_golite062009 |
| structural molecule activity | 4.261982318682 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.56893064485672 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| 5S rRNA binding | 2.25646775578129 | bayes_pls_golite062009 |
| rRNA binding | 2.12571610259264 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| nucleic acid binding | 1.64840822019417 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.50161401062914 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| binding | 1.11291710031577 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.06535308346284 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
