| Protein: | SYWM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 408 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYWM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
409.0 | [0..1] | [408..1] |
|
Region A: Residues: [1-408] |
1 11 21 31 41 51
| | | | | |
1 MGHATSLSHF LILSSSRFSR LGSLTRLLSK PTSLSGSFSS ISVTGQGFRC CCSVATDDTS 60
61 PSVKKRVVSG VQPTGSVHLG NYLGAIKNWV ALQDTYETLF IIVDHHAITL PYDTRQLGKA 120
121 TTDTAALYLA CGIDVSKASV FVQSHVPAHV ELMWLLCSST PIGWLQKMIQ FKEKSRKEGV 180
181 ENASVGLFTY PDLMTADILL YQSDFVPVGE DQKQHIELAR EIAQRVNHLY GGKKWKKLGG 240
241 RGGSLFKIPE PLIPQAGARV MSLTDGLSKM SKSAPSDQSR INLLDSKDLI VDKIKRCKTD 300
301 SFAGLEFDNA ERPECNNLLS IYQIVSGKKK EEVMEECKDM SWGTFKPLLA DALIEHLSPI 360
361 QARYQEIIAE PEYLDKILSE GADRAEELGA VTMRNMYQAM GYYQRRRY
|
| Detection Method: |  |
| Confidence: | 100.0 |
| Match: | 1i6kA |
| Description: | Tryptophanyl-tRNA synthetase (TrpRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 5.34430928486195 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.56893064485672 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.50161401062914 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| binding | 0.535704308663141 | bayes_pls_golite062009 |
| nucleic acid binding | 0.449504767632354 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.2293846471193 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.126511747475258 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
