| Protein: | gi|46016025, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46016025, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
287.0 | [0..11] | [285..202] |
|
Region A: Residues: [1-300] |
1 11 21 31 41 51
| | | | | |
1 MSSSSSPAIE PDTPDLICQL DNVQGMVDAL TCVRWKRHQD ALVELSEHGI VLIVEESGCL 60
61 QAKVYLQREL FTKYEYGAQG RPRFGISLGL LVDCLNTFSS PGHSNTIEIK YPGPDMELLL 120
121 KSVDTLNSCI YSEIRTRIPE TVTWDYNFEQ AGIAPLTFTV KSAALKEAID DLEWPGSSVQ 180
181 ISLQKEPPCV IFRGEGHGDL QIDFMYYANT DLLLAFHCDT EVSYGYKYKF LKATTANIPG 240
241 NVVRENRGSK LTIGRGGMLK VQHLVSVSKA LAPQVESAGY QPPSRIAYIE FFVKPEEPAD 300
301
|
| Detection Method: |  |
| Confidence: | 71.0 |
| Match: | 1axcA |
| Description: | Prolifirating cell nuclear antigen (PCNA) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA polymerase activity | 4.03805427520849 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 4.03676997767928 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 2.73498799665327 | bayes_pls_golite062009 |
| binding | 1.88302251910664 | bayes_pls_golite062009 |
| nucleic acid binding | 1.30503066394007 | bayes_pls_golite062009 |
| DNA binding | 1.08991130379715 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.82032718298306 | bayes_pls_golite062009 |
| catalytic activity | 0.48077242755678 | bayes_pls_golite062009 |
| protein binding | 0.452894757163315 | bayes_pls_golite062009 |
| DNA polymerase processivity factor activity | 0.35827096673638 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.252286203059537 | bayes_pls_golite062009 |
