| Protein: | TAF4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 720 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..1] | [720..1] |
|
|
178.0 | [0..39] | [715..341] |
|
|
172.0 | [0..14] | [715..205] |
|
|
165.0 | [0..135] | [715..176] |
|
Region A: Residues: [1-228] |
1 11 21 31 41 51
| | | | | |
1 MDLSIVKLLE EDEEVDSKHS EDDLQMFQDS LIRDIEGSNL KSINNTTGNE SEKPQPRYMK 60
61 LQKMSSKETP WVEKTVDPVN HNLRLARVTD LLRTVVDHQP GKKTHCLNLH YKLKRKELTM 120
121 EEFMRQLRDL VGDQIIRSVI SQLPQLKPGN MGIKVPGRSN HDKVSKSAEF TAQESDPREV 180
181 HVNQLSSTTS GTLNSSTTVQ GLNKHPEQHM QLPSSSFHMD TKSGSLNP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [229-409] |
1 11 21 31 41 51
| | | | | |
1 YPGTNVTSPG SSSRAKLPDF QHRENNQNVG IASVGGPTKS TINMTTVPKF ERPTFVNGPS 60
61 RVQDGPISDF PKNSSFPLYS APWQGSVTKD HTVGPSSSVI HVEHKLIDQS FEQAHKPRYL 120
121 VQQGVTNVPL KQKNAIPISS NDDLEKQSSK MGLFTSTTSA SSVFPSMTTQ LDSSTMVNMP 180
181 A
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [410-506] |
1 11 21 31 41 51
| | | | | |
1 PSETIPKIAN VTVTPKMPSV GQKKPLEALG SSLPPSRKKQ KICGTSSDES IEKFNDVTAV 60
61 SGINLREEEK QLLDSGPKKN DRVSKAYRRL VHGEEER
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [507-568] |
1 11 21 31 41 51
| | | | | |
1 TLLQKIPLQR KLTEIMGKSG LKHIDHDVER CLSLCVEERM RGLLFNIIRI SKQRTDAEKC 60
61 RN
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1h3oA |
| Description: | TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [569-720] |
1 11 21 31 41 51
| | | | | |
1 RTFITSDIRK EINEMNQKVK EEWEKKHSGE EKNKENDTEK EDQRSNEVKA NKKDEDKERA 60
61 KAANVAVRAA VGGDDRFSKW KLMAEARQRS SPGPGRNSKK LSGGTQFGKN QGLPKVVRSI 120
121 SVKDVIAVVE KEPQMSRSTL LYRVYNRICS DV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
