| Protein: | ROC1_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 784 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ROC1_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
860.0 | [0..1] | [784..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MTPARRMPPV IGRNGVAYES PSAQLPLTQA DMLDSHHLQQ ALQQQYFDQI PVTTTAAADS 60
61 GDNMLHGRAD AGGLVDEFES KSCSENVD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-183] |
1 11 21 31 41 51
| | | | | |
1 GAGDGLSGDD QDPNQRPRKK RYHRHTQHQI QEMEAFFKEC PHPDDKQRKE LSRELGLEPL 60
61 QVKFWFQNKR TQMKNQHERH ENAQLRAEND KLRAE
|
| Detection Method: | |
| Confidence: | 17.221849 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [184-265] |
1 11 21 31 41 51
| | | | | |
1 NMRYKEALSS ASCPNCGGPA ALGEMSFDEH HLRVENARLR DEIDRISGIA AKHVGKPPIV 60
61 SFPVLSSPLA VAAARSPLDL AG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [266-532] |
1 11 21 31 41 51
| | | | | |
1 AYGVVTPGLD MFGGAGDLLR GVHPLDADKP MIVELAVAAM DELVQMAQLD EPLWSSSSEP 60
61 AAALLDEEEY ARMFPRGLGP KQYGLKSEAS RHGAVVIMTH SNLVEILMDV NQFATVFSSI 120
121 VSRASTHEVL STGVAGNYNG ALQVMSMEFQ VPSPLVPTRE SYFVRYCKNN SDGTWAVVDV 180
181 SLDSLRPSPV QKCRRRPSGC LIQEMPNGYS KVTWVEHVEV DDSSVHNIYK PLVNSGLAFG 240
241 AKRWVGTLDR QCERLASAMA SNIPNGD
|
| Detection Method: | |
| Confidence: | 2.73 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [533-659] |
1 11 21 31 41 51
| | | | | |
1 LGVITSVEGR KSMLKLAERM VASFCGGVTA SVAHQWTTLS GSGAEDVRVM TRKSVDDPGR 60
61 PPGIVLNAAT SFWLPVPPAA VFDFLRDETS RSEWDILSNG GAVQEMAHIA NGRDHGNSVS 120
121 LLRVNSA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [660-784] |
1 11 21 31 41 51
| | | | | |
1 NSNQSNMLIL QESCTDASGS YVVYAPVDIV AMNVVLNGGD PDYVALLPSG FAILPDGPSG 60
61 NAQAAVGENG SGSGGGSLLT VAFQILVDSV PTAKLSLGSV ATVNSLIACT VERIKAAVCR 120
121 DSNPQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
