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View Structure Prediction Details

Protein: gi|37805865, gi|...
Organism: Oryza sativa Japonica Group
Length: 725 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37805865, gi|....

Description E-value Query
Range
Subject
Range
gi|113623001, gi... - gi|222639944|gb|EEE68076.1| hypothetical protein OsJ_26106 [Oryza sativa Japonica Group], gi|1154748...
324.0 [0..1] [725..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEINSSGEEA VVKVRKPYTI TKQRERWTEA EHNRFLEALK LYGRAWQRIE EHVGTKTAVQ  60
   61 IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NSPYPRKSCL SSETSTREVQ 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2v1dB
Description: No description for 2v1dB was found.

Predicted Domain #2
Region A:
Residues: [121-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDKATISNMT NNSTAQMAGD AALEKLTYIQ KLQRKEISEK GSCSEVLNLF REVPSASFSS  60
   61 VNKSSSNHGA SRGLEPTKTE VKDVVILERD SISNGAGKDA KDINDQEMER LNGIHISSKP 120
  121 DHSHENCLDT SSQQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [255-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKPKSNSVET TYVDWSAAKA SHYQMDRNGV TGFQATGTEG SHPDQTSDQM GGASGTMNQC  60
   61 IHPTLPVDPK FDGNAAAQPF PHNYAAFAPM MQCHCNQDAY RSFANMSSTF SSMLVSTLLS 120
  121 NPAIHAAARL AASYWPTVDG NTPDPNQENL SESAQGSHAG SPPNMASIVT ATVAAASAWW 180
  181 ATQGLLPLFP PPIAFPFVPA PSAPF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [460-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STADVQRAQE KDIDCPMDNA QKELQETRKQ DNFEAMKVIV SSETDESGKG EVSLHTELKI  60
   61 SPADKADTKP AAGAETSDVF GNKKKQDRSS CGSNTPSSSD IEADNAPENQ EKANDKAKQA 120
  121 SCSNSSAGDN NHRRFRSSAS TSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [603-725]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SWKEVSEEGR LAFDALFSRE RLPQSFSPPQ VEGSKEISKE EEDEVTTVTV DLNKNAAIID  60
   61 QELDTADEPR ASFPNELSNL KLKSRRTGFK PYKRCSVEAK ENRVPASDEV GTKRIRLESE 120
  121 AST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle