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Protein Overview: gi|113623001, gi...

General Information:
Name(s) found: gi|222639944 [NCBI NR]
gi|115474871 [NCBI NR]
gi|113623001 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|222639944|gb|EEE68076.1| hypothetical protein OsJ_26106 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115474871|ref|NP_001061032.1| Os08g0157600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113623001|dbj|BAF22946.1| Os08g0157600 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 719 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEINSSGEEA VVKVRKPYTI TKQRERWTEA EHNRFLEALK LYGRAWQRIE EHVGTKTAVQ  60
   61 IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NSPYPRKSCL SSETSTREVQ 120
  121 NDKATISNMT NNSTAQMAGD AALEKLQRKE ISEKGSCSEV LNLFREVPSA SFSSVNKSSS 180
  181 NHGASRGLEP TKTEVKDVVI LERDSISNGA GKDAKDINDQ EMERLNGIHI SSKPDHSHEN 240
  241 CLDTSSQQFK PKSNSVETTY VDWSAAKASH YQMDRNGVTG FQATGTEGSH PDQTSDQMGG 300
  301 ASGTMNQCIH PTLPVDPKFD GNAAAQPFPH NYAAFAPMMQ CHCNQDAYRS FANMSSTFSS 360
  361 MLVSTLLSNP AIHAAARLAA SYWPTVDGNT PDPNQENLSE SAQGSHAGSP PNMASIVTAT 420
  421 VAAASAWWAT QGLLPLFPPP IAFPFVPAPS APFSTADVQR AQEKDIDCPM DNAQKELQET 480
  481 RKQDNFEAMK VIVSSETDES GKGEVSLHTE LKISPADKAD TKPAAGAETS DVFGNKKKQD 540
  541 RSSCGSNTPS SSDIEADNAP ENQEKANDKA KQASCSNSSA GDNNHRRFRS SASTSDSWKE 600
  601 VSEEGRLAFD ALFSRERLPQ SFSPPQVEGS KEISKEEEDE VTTVTVDLNK NAAIIDQELD 660
  661 TADEPRASFP NELSNLKLKS RRTGFKPYKR CSVEAKENRV PASDEVGTKR IRLESEAST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 22.39794 c-Myb, DNA-binding domain
    2 View Details [115..298] deduced N/A No confident structure predictions are available.
    3 View Details [299..535] MSA 3.225994 View MSA. No confident structure predictions are available.
    4 View Details [536..719] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle