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Protein Overview: gi|37805865, gi|...

General Information:
Name(s) found: gi|50941323 [NCBI NR]
gi|37805865 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|50941323|ref|XP_480189.1| putative LHY protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|37805865|dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 725 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEINSSGEEA VVKVRKPYTI TKQRERWTEA EHNRFLEALK LYGRAWQRIE EHVGTKTAVQ  60
   61 IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NSPYPRKSCL SSETSTREVQ 120
  121 NDKATISNMT NNSTAQMAGD AALEKLTYIQ KLQRKEISEK GSCSEVLNLF REVPSASFSS 180
  181 VNKSSSNHGA SRGLEPTKTE VKDVVILERD SISNGAGKDA KDINDQEMER LNGIHISSKP 240
  241 DHSHENCLDT SSQQFKPKSN SVETTYVDWS AAKASHYQMD RNGVTGFQAT GTEGSHPDQT 300
  301 SDQMGGASGT MNQCIHPTLP VDPKFDGNAA AQPFPHNYAA FAPMMQCHCN QDAYRSFANM 360
  361 SSTFSSMLVS TLLSNPAIHA AARLAASYWP TVDGNTPDPN QENLSESAQG SHAGSPPNMA 420
  421 SIVTATVAAA SAWWATQGLL PLFPPPIAFP FVPAPSAPFS TADVQRAQEK DIDCPMDNAQ 480
  481 KELQETRKQD NFEAMKVIVS SETDESGKGE VSLHTELKIS PADKADTKPA AGAETSDVFG 540
  541 NKKKQDRSSC GSNTPSSSDI EADNAPENQE KANDKAKQAS CSNSSAGDNN HRRFRSSAST 600
  601 SDSWKEVSEE GRLAFDALFS RERLPQSFSP PQVEGSKEIS KEEEDEVTTV TVDLNKNAAI 660
  661 IDQELDTADE PRASFPNELS NLKLKSRRTG FKPYKRCSVE AKENRVPASD EVGTKRIRLE 720
  721 SEAST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 7.69897 No description for 2v1dB was found.
    2 View Details [121..254] deduced N/A No confident structure predictions are available.
    3 View Details [255..459] deduced N/A No confident structure predictions are available.
    4 View Details [460..602] MSA 3.213993 View MSA. No confident structure predictions are available.
    5 View Details [603..725] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle