| Protein: | gi|46390797, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 401 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46390797, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
341.0 | [0..36] | [399..162] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MGGVIGALFR GGGHRREMHR APMNQPGYGG GGENHRRAML TKKYSYIPDN YQSLDQVTAA 60
61 LRDQGLESSN LILGIDFTKS NEWTGKRSFS GQSLHKIGST PNPYEQAISI IGKTLAPFDD 120
121 DNLIPCFGFG DATTHDYNVF SFHPDNSPCH GFEEVLSCYK KIVPHLRLSG PTSFAPIVEA 180
181 AVDIVDRSGG QYHVLVIVAD GQVTRSVDTS DNDLSPQERR TVDSVVMASS
|
| Detection Method: |  |
| Confidence: | 1.7 |
| Match: | 1aoxA |
| Description: | Integrin alpha2-beta1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [231-401] |
1 11 21 31 41 51
| | | | | |
1 YPLSIVLVGV GDGPWEDMQK FDDKIPARQF DNFQFVNFTS IMSRSTTQQQ KESAFALAAL 60
61 MEVPIQYKAT MELGILGRST GKAKRIMPAP PPLPSAAGRQ PSLRREDSAA ATAAAAPPSP 120
121 REDQVCPICL TNAKDLAFGC GHMCCRECGE SLTKCPICRQ TIRSKLRLYS G
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | 1fbvA |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.434026084000615 | bayes_pls_golite062009 |
| protein binding | 0.31534665043077 | bayes_pls_golite062009 |
