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Protein Overview: gi|46390797, gi|...

General Information:
Name(s) found: gi|51964680 [NCBI NR]
gi|50940881 [NCBI NR]
gi|46390797 [NCBI NR]
gi|222639870 [NCBI NR]
gi|215706364 [NCBI NR]
gi|115474689 [NCBI NR]
gi|113622910 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|51964680|ref|XP_507124.1| PREDICTED P0680F05.38 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50940881|ref|XP_479968.1| Copine I-like protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|46390797|dbj|BAD16303.1| Copine I-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222639870|gb|EEE68002.1| hypothetical protein OsJ_25957 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215706364|dbj|BAG93220.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115474689|ref|NP_001060941.1| Os08g0135400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113622910|dbj|BAF22855.1| Os08g0135400 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGVIGALFR GGGHRREMHR APMNQPGYGG GGENHRRAML TKKYSYIPDN YQSLDQVTAA  60
   61 LRDQGLESSN LILGIDFTKS NEWTGKRSFS GQSLHKIGST PNPYEQAISI IGKTLAPFDD 120
  121 DNLIPCFGFG DATTHDYNVF SFHPDNSPCH GFEEVLSCYK KIVPHLRLSG PTSFAPIVEA 180
  181 AVDIVDRSGG QYHVLVIVAD GQVTRSVDTS DNDLSPQERR TVDSVVMASS YPLSIVLVGV 240
  241 GDGPWEDMQK FDDKIPARQF DNFQFVNFTS IMSRSTTQQQ KESAFALAAL MEVPIQYKAT 300
  301 MELGILGRST GKAKRIMPAP PPLPSAAGRQ PSLRREDSAA ATAAAAPPSP REDQVCPICL 360
  361 TNAKDLAFGC GHMCCRECGE SLTKCPICRQ TIRSKLRLYS G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] FFAS03 1.7 Integrin alpha2-beta1
    2 View Details [231..401] PSI-BLAST 12.221849 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.434026084000615 bayes_pls_golite062009
  • protein binding
    		•  0.31534665043077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle