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Protein Overview: gi|215678616, gi...

General Information:
Name(s) found: gi|215678616 [NCBI NR]
gi|115488212 [NCBI NR]
gi|113649100 [NCBI NR]
gi|108862498 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|215678616|dbj|BAG92271.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115488212|ref|NP_001066593.1| Os12g0288400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113649100|dbj|BAF29612.1| Os12g0288400 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108862498|gb|ABA97133.2| copine, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 546 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFLAVVGK VGTFLLWLLF LVLQTATKIV GSLLAAGPPP ADAQEAAAAA AARRRSPPAS  60
   61 PHSGGGATDP YQPPQLWDPP PPSSPYSAGH AADEYSSSSS YRRRGASAPP AEDVVVSSSY 120
  121 SRPAAAVASA PQACTVSSAP PLRAVETRSP APSRAAAAVG GKRPKLERKY SKIVDQYRSL 180
  181 DEVIEALAQA GLESSNLIIG IDFTKSNEWT GKRSFNGMSL HHIGDSPNPY EQAITIIGQT 240
  241 LSAFDEDNLI PCYGFGDAST HDQDVFAFYP DERPCNGFQE ALARYREIVP HLRLSGPTSF 300
  301 SPIIEMATTI VEQSGGQYHV LVIIADGQVT RSVDTEFGQL STQEQMTVDA IVQASEFPLS 360
  361 IILVGVGDGP WDMMKEFDDN IPARSFDNFQ FVNFTSIMSK KISQSKKETE FALSALMEIP 420
  421 LQYKATLELG ILGRRFAKSP ERVPLPPPFA SYNTISRAAP SRANSFRSMP SHPRDEAPVD 480
  481 SAITASVTSP PSVDARAAEP QLCPVCLSKP RDMAFGCGHQ TCAECGPQVE HCPICRRPID 540
  541 TRVKLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] MSA 28.139997 View MSA. No confident structure predictions are available.
    2 View Details [155..386] FFAS03 1.39 Crystal structure of B. anthracis Protective Antigen complexed with human Anthrax toxin receptor
    3 View Details [387..461] PSI-BLAST 6.522879 Structure of an ML-IAP/XIAP chimera bound to a 9mer peptide derived from Smac
    4 View Details [462..546] PSI-BLAST 7.30103 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.131502804004452 bayes_pls_golite062009
    4
    Term Confidence Notes
  • binding
    		•  0.434026084000615 bayes_pls_golite062009
  • protein binding
    		•  0.31534665043077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle