| Protein: | SLU7_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLU7_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
710.0 | [0..1] | [535..1] |
|
|
695.0 | [0..1] | [535..67] |
|
|
685.0 | [0..1] | [535..20] |
|
|
683.0 | [0..1] | [535..20] |
|
|
682.0 | [0..1] | [535..20] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MATASVSFKS REDHRKQLEL EEARKAGLAP AEVDEDGKEI NPHIPQYMSS APWYLNADKP 60
61 SLKHQRNWKS DPNYTKSWYD RGAKLFQANK YRKGACENCG AMTHDKKSCM ERPRSVGAKW 120
121 TNINIA
|
| Detection Method: |  |
| Confidence: | 0.998 |
| Match: | 1a1tA |
| Description: | HIV nucleocapsid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [127-354] |
1 11 21 31 41 51
| | | | | |
1 PDEKVESFEL DYDGKRDRWN GYDPSTYTRV IADYEAREEA RKKYLKEQQL KKLEEKDGEE 60
61 GDENVASEEE DEEDGLKIDE AKVDESAQMD FAKVEKRVRT TGGGSTGTVR NLRIREDTAK 120
121 YLLNLDVNSA YYDPKTRSMR EDPLPDADPN DKFYVGDNQN RLSGQALEFK QLNIHAWEAF 180
181 DKGQDIHMQA APSQAELLFK SFKIKKEKLK SENKDKIMEK YGNAASEE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [355-436] |
1 11 21 31 41 51
| | | | | |
1 PIPRELLLGQ SEKEIEYDRT GRIIKGQDVA LPKSKYEEDV FINNHTTVWG SWWKDHQWGY 60
61 KCCKQTIRNS YCTGLAGIEA AE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.616 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.616 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.376 | N/A | N/A | b.43.3 | Translation proteins |
| View | Download | 0.354 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.350 | N/A | N/A | d.82.4 | Description not found. |
| View | Download | 0.339 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.318 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.309 | N/A | N/A | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.292 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
|
Region A: Residues: [437-536] |
1 11 21 31 41 51
| | | | | |
1 ASADLMKANM ARKEAAEDEP VRHEEKRLAT WGTDVPNDIV LDKKLLDEAL KKEGARRKEE 60
61 MDERKRKYNV KWNDEVTAED MEAYRMKRIH HDDPMRDFLH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.504 | a.60.8 | HRDC-like |
| View | Download | 0.488 | d.218.1 | Nucleotidyltransferase |
| View | Download | 0.477 | a.29.14 | Description not found. |
| View | Download | 0.412 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.377 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.377 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.304 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.297 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.296 | a.77.1 | DEATH domain |
| View | Download | 0.285 | a.74.1 | Cyclin-like |
