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Protein Overview: SLU7_ORYSJ

General Information:
Name(s) found: SLU7_ORYSJ [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica GN=Os08g0127700 PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATASVSFKS REDHRKQLEL EEARKAGLAP AEVDEDGKEI NPHIPQYMSS APWYLNADKP  60
   61 SLKHQRNWKS DPNYTKSWYD RGAKLFQANK YRKGACENCG AMTHDKKSCM ERPRSVGAKW 120
  121 TNINIAPDEK VESFELDYDG KRDRWNGYDP STYTRVIADY EAREEARKKY LKEQQLKKLE 180
  181 EKDGEEGDEN VASEEEDEED GLKIDEAKVD ESAQMDFAKV EKRVRTTGGG STGTVRNLRI 240
  241 REDTAKYLLN LDVNSAYYDP KTRSMREDPL PDADPNDKFY VGDNQNRLSG QALEFKQLNI 300
  301 HAWEAFDKGQ DIHMQAAPSQ AELLFKSFKI KKEKLKSENK DKIMEKYGNA ASEEPIPREL 360
  361 LLGQSEKEIE YDRTGRIIKG QDVALPKSKY EEDVFINNHT TVWGSWWKDH QWGYKCCKQT 420
  421 IRNSYCTGLA GIEAAEASAD LMKANMARKE AAEDEPVRHE EKRLATWGTD VPNDIVLDKK 480
  481 LLDEALKKEG ARRKEEMDER KRKYNVKWND EVTAEDMEAY RMKRIHHDDP MRDFLH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] FFAS03 0.998 HIV nucleocapsid
    2 View Details [127..354] deduced N/A No confident structure predictions are available.
    3 View Details [355..436] MSA 2.035989 View MSA. No confident structure predictions are available.
    4 View Details [437..536] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle