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Protein Overview: SLU7A_ARATH

General Information:
Name(s) found: SLU7A_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana GN=At1g65660 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 535 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: RNA splicing [TAS]
    positive regulation of cell proliferation [IMP]
    Molecular Function: nucleic acid binding [ISS]
    single-stranded RNA binding [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATASVAFKS REDHRKQIEL EEARKAGLAP AEVDEDGKEI NPHIPQYMSS APWYLNSEKP  60
   61 SLKHQRKWKS DPNYTKSWYD RGAKIFQAEK YRKGACQNCG AMTHTAKACM DRPRKIGAKY 120
  121 TNMNIAPDEK IESFELDYDG KRDRWNGYDP STYHRVIDLY EAKEDARKKY LKEQQLKKLE 180
  181 EKNNNEKGDD ANSDGEEDED DLRVDEAKVD ESRQMDFAKV EKRVRTTGGG STGTVRNLRI 240
  241 REDTAKYLLN LDVNSAHYDP KTRSMREDPL PDADPNDKFY LGDNQYRNSG QALEFKQLNI 300
  301 HSWEAFDKGQ DMHMQAAPSQ AELLYKSFQV AKEKLKSQTK DTIMDKYGNA ATEDEIPMEL 360
  361 LLGQSERQVE YDRAGRIIKG QEVILPKSKY EEDVHANNHT SVWGSYWKDH QWGYKCCQQI 420
  421 IRNSYCTGSA GIEAAEAALD LMKANIARKE ATEESPKKVE EKRMASWGTD IPEDLELNEE 480
  481 ALANALKKED LSRREEKDER KRKYNVKYNN DVTPEEMEAY RMKRVHHEDP MKDFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] MSA 1.041986 View MSA. No confident structure predictions are available.
    2 View Details [185..309] deduced N/A No confident structure predictions are available.
    3 View Details [310..535] MSA 3.043985 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle