| Protein: | gi|49388096, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49388096, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
202.0 | [0..1] | [299..1] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MGRAPCCDKK GLKKGPWTPE EDKLLVDYIQ ANGHGSWRLL PKLAGLNRCG KSCRLRWTNY 60
61 LRPDIKRGPF TAEEQKSIVQ LHGIVGNKWS MIAAQLPGRT DNEIKNYWNT HLKKQLRRMG 120
121 LDDPPPGPA
|
| Detection Method: |  |
| Confidence: | 35.522879 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [130-300] |
1 11 21 31 41 51
| | | | | |
1 AGCPAARHMA QWETARLEAE ARLSLLSSSG AAATTTITAA TTTTSASSSS TTAGPVAAAA 60
61 TSPADVFLRL WNSSIGDSFR KLAVVAAGSS SPSRADVTKD AVKQEEEAAP AGDDSSAASN 120
121 EVEAATMAVD EYQMFLDFAG EELGLFHGRY GGFSLFPPVD LLEASLETAF K
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
