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Protein Overview: gi|41619302, gi|...

General Information:
Name(s) found: gi|6850892 [NCBI NR]
gi|41619302 [NCBI NR]
gi|193885153 [NCBI NR]
gi|15233066 [NCBI NR]
gi|11273969 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|6850892|emb|CAB71055.1| putative transcription factor (MYB17) [Arabidopsis thaliana] [NCBI NR]
  • gi|41619302|gb|AAS10071.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|193885153|gb|ACF28390.1| At3g61250 [Arabidopsis thaliana] [NCBI NR]
  • gi|15233066|ref|NP_191684.1| AtMYB17 (myb domain protein 17); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T47917 probable transcription factor MYB17 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to jasmonic acid stimulus [IEP]
    response to salicylic acid stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRTPCCDKI GLKKGPWTPE EDEVLVAHIK KNGHGSWRTL PKLAGLLRCG KSCRLRWTNY  60
   61 LRPDIKRGPF TADEEKLVIQ LHAILGNRWA AIAAQLPGRT DNEIKNLWNT HLKKRLLSMG 120
  121 LDPRTHEPLP SYGLAKQAPS SPTTRHMAQW ESARVEAEAR LSRESMLFSP SFYSGVVKTE 180
  181 CDHFLRIWNS EIGEAFRNLA PLDESTITSQ SPCSRATSTS SALLKSSTNS WGGKEVTVAI 240
  241 HGSDYSPYSN DLEDDSTDSA LQLLLDFPIS DDDMSFLEEN IDSYSQAPPI GLVSMVSKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] PSI-BLAST 36.0 c-Myb, DNA-binding domain
    2 View Details [178..299] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle