| Protein: | gi|51964060, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 734 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51964060, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
599.0 | [0..12] | [731..2] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MDVELNSRAL MDEALKARDA AERKFHARDV KGARRSAIKA QNLCPSLDGI SQMVSTLEVL 60
61 LASESKVDGE NDWYRILSLS ASADEEEVKK QYRKLALQLH PDKNKSVGAE GAFKLISEAW 120
121 AVLSDKSRKM QYDQKRKDHP VTNGANGLYT YDKKAHKRA
|
| Detection Method: |  |
| Confidence: | 17.69897 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [160-400] |
1 11 21 31 41 51
| | | | | |
1 RKNAAASAAA AAAAAAAAAE ATTRPVGLDT FWTSCNRCRM QYEYLRIYLN HNLLCPNCHH 60
61 AFMAVETGYP CNGTSSSFSW STKQQQQNHK HSYSSASRTS GVPGTGHGVY QQENTYETYN 120
121 NQSFQWNQYS KTNNSAGTNA YSSTASEKPK RKHEESYIYN YSSSGNEFGQ ERPTSGRGRF 180
181 SKRRQNINNG YASVDCNGDN KETVAATAGT TVLADVGRVN GTSVEKFRSA VSGRRANVMR 240
241 E
|
| Detection Method: | |
| Confidence: | 31.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.036672061154828 | bayes_pls_golite062009 |
|
Region A: Residues: [401-482] |
1 11 21 31 41 51
| | | | | |
1 IFQLDTRGLL IEKAKAAIRE KLQDLNISAT RHIAAKGKAE RKNHVDHDVK GNGILPHNPS 60
61 HKFKICNSKG ADVENPATDE NN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [483-734] |
1 11 21 31 41 51
| | | | | |
1 LEQKRVPVSI DVPDPDFYDF DKDRTERTFD NDQVWATYDS EDGMPRLYAM VQKVISRKPF 60
61 RIRMSFLNSK SNIELSPINW VASGFSKTCG DFRVGRYQIF ETVNIFSHRV SWSKGPRGII 120
121 KIVPKKGDTW ALYRNWSSDW NELTPDDVIY KYEIVEVIDD FTDEQGVTVI PLLKVAGFKA 180
181 VFHRRTDSDV VRRIPKEELF RFSHRVPSRL LTGEEGNNAP KGCHELDPAA TPVDLLKVIT 240
241 EVKEVATTEI SE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
