| Protein: | gi|34499596, gi|... |
| Organism: | Chromobacterium violaceum ATCC 12472 |
| Length: | 286 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34499596, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
242.0 | [0..4] | [286..6] |
|
Region A: Residues: [1-286] |
1 11 21 31 41 51
| | | | | |
1 MDKADRYARR FEKVLDYIAS HLDQPLDVER LSQVAHFSRF HFHRQFSAYL GVGVARYILM 60
61 QRLRRASYWL AFQPQRKITA IALDCGFDNP ETFSRAFRQA LGRSPSEFRR RPDWPDWHAR 120
121 MTPPVRERVA SMEVNIVTVE PVMVAALEHL GPPDRVNDSA QRFIAWRKES GLSPVASSQT 180
181 YGIAYDNPET SEPQRFRFDI CGSVAGPVPA NPQGVIVKQI PGGRCAVARH RGSHHDLGDT 240
241 IWHLYREWLP ASGETLRDFP VYFHYLNLAS DTPEHLLLTD VHLPLR
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1d5yA |
| Description: | Rob transcription factor, N-terminal domain; Rob transcription factor, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.57523737355937 | bayes_pls_golite062009 |
| DNA binding | 3.00143272905695 | bayes_pls_golite062009 |
| nucleic acid binding | 2.89825020286436 | bayes_pls_golite062009 |
| transcription factor activity | 2.53664874743748 | bayes_pls_golite062009 |
| binding | 1.68817361068715 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.46503550280898 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.24108783215685 | bayes_pls_golite062009 |
| transcription repressor activity | 0.20862059645422 | bayes_pls_golite062009 |
| protein binding | 0.111941607625758 | bayes_pls_golite062009 |
