| Protein: | gi|34103108, gi|... |
| Organism: | Chromobacterium violaceum ATCC 12472 |
| Length: | 143 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34103108, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
177.0 | [0..1] | [137..1] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MSKASHLKDI GLKATGPRLK ILDLFEQGDA GHMSAEDVYR KLLAENIDIG LATIYRVLTQ 60
61 FEQAGILVRH HFETGKAVYE LNQGGHHDHM VCVSCGKVVE FFDPEIEALQ DRIAEQHGFR 120
121 IVEHALYMYG ECPDCLGKSG RRG
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 1mzbA |
| Description: | Ferric uptake regulator |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.51306541310201 | bayes_pls_golite062009 |
| DNA binding | 4.12876602944304 | bayes_pls_golite062009 |
| nucleic acid binding | 4.12610640813616 | bayes_pls_golite062009 |
| transcription factor activity | 3.36245551077648 | bayes_pls_golite062009 |
| binding | 2.88885372623841 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.57171040630767 | bayes_pls_golite062009 |
| transcription activator activity | 1.46816740214642 | bayes_pls_golite062009 |
| transcription repressor activity | 1.35320462873179 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.77269240913386 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
