| Protein: | gi|115483276, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 757 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115483276, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
568.0 | [0..22] | [752..26] |
|
Region A: Residues: [1-219] |
1 11 21 31 41 51
| | | | | |
1 MATAPLAFHL PFPFPSASRP PPRLLPPSRR PPAARLAATR RFRPPTADDE PPEAAEDSSH 60
61 GLNRYDQLTR HVERARRRQQ AEQPEITPDH PLFSSPPSSG EAGSYDPDDE FFDEIDRAIA 120
121 EKREEFTRRG LIKPSAPAPS QPEEEDGLAD ELSPEEVIDL DEIRRLQGLS VVSLADEEDE 180
181 EANGGGGGVD YGDDGVPLDD DGEVFDVADE VGLEGARVR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [220-757] |
1 11 21 31 41 51
| | | | | |
1 YPAFRMTLAE LLDESKLVPV AVTGDQDVAL AGVQRDASLV AAGDLYVCVG EEGLAGLTEA 60
61 DKRGAVAVVA DQTVDIEGTL ACRALVIVDD ITAALRMLPA CLYRRPSKDM AVIGVAGTDG 120
121 VTTTAHLVRA MYEAMGVRTG MVGVLGAYAF GNNKLDAQPD ASGDPIAVQR LMATMLYNGA 180
181 EAALLEATTD GMPSSGVDSE IDYDIAVLTN VRHAGDEAGM TYEEYMNSMA SLFSRMVDPE 240
241 RHRKVVNIDD PSAPFFAAQG GQDVPVVTYS FENKKADVHT LKYQLSLFET EVLVQTPHGI 300
301 LEISSGLLGR DNIYNILASV AVGVAVGAPL EDIVKGIEEV DAIPGRCELI DEEQAFGVIV 360
361 DHARTPESLS RLLDGVKELG PRRIVTVIGC CGERERGKRP VMTKVAAEKS DVVMLTSDNP 420
421 ANEDPLDILD DMLAGVGWTM EEYLKHGTND YYPPLPNGHR IFLHDIRRVA VRAAVAMGEQ 480
481 GDVVVITGKG NDTYQIEVDK KEFFDDREEC REALQYVDQL HRAGIDTSEF PWRLPESH
|
| Detection Method: | |
| Confidence: | 97.0 |
| Match: | 1e8cA |
| Description: | UDP-N-acetylmuramyl tripeptide synthetase MurE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| acid-amino acid ligase activity | 4.3848849271737 | bayes_pls_golite062009 |
| UDP-N-acetylmuramoylalanine-D-glutamate ligase activity | 3.04057100727193 | bayes_pls_golite062009 |
| catalytic activity | 2.69237345802213 | bayes_pls_golite062009 |
| UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity | 2.38541436302257 | bayes_pls_golite062009 |
| ligase activity | 1.78239041548143 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 1.71419714956382 | bayes_pls_golite062009 |
| UDP-N-acetylmuramate-L-alanine ligase activity | 1.40798709360658 | bayes_pls_golite062009 |
| UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity | 1.15437935952018 | bayes_pls_golite062009 |
