| Protein: | DRB6_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRB6_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
203.0 | [0..53] | [511..700] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MYKNQLQELA QRSCFNLPAY TCLREGPDHA PRFKAAVNFN GEQFESPGFF TTLRQAEHAA 60
61 AEVALAALAR RGPSYSLAAR ILDETGVYKN LLQEVAQRVG APLPSYTTER SGLGHLPVFT 120
121 CTVELAGITF TGDPAKNKKQ AEKNAASAAW SSLRQLVRQE ASSS
|
| Detection Method: |  |
| Confidence: | 14.0 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.602312874472495 | bayes_pls_golite062009 |
|
Region A: Residues: [165-287] |
1 11 21 31 41 51
| | | | | |
1 NEPESNDEQE QIRIARALLN YRLKEKMAMA NNPHASPFPK KFPMQPERRT AFPQSSHSSY 60
61 SKILPLFRPK SNSRSRPESP AASDAASQTP FRPTESPNPR SRFPAAEAAP YVPVGHFRMP 120
121 CHS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [288-514] |
1 11 21 31 41 51
| | | | | |
1 MAPPVTVRTS IPVFSAPPLP PPGARTQQLP PLMSHPPPIR MASPVRIRPA PPLFTPSAVQ 60
61 GPKPMMPVQI KDVQHQQIKE TRSPVMPVQV KDAQNQLLKG SLSPVIPVQI KDVQSQPPKE 120
121 ALSPAIPVQI KDVQLQPRNE PVSIGKGVVP LPAIRPPVKV EAPAEVKEAS QPVAGSSVVQ 180
181 CKADTSPDSL PKTQLKTANA DNADAKDDHL PVDAEEVEDI IRHLELK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
