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Protein Overview: DRB6_ORYSJ

General Information:
Name(s) found: DRB6_ORYSJ [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 514 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKNQLQELA QRSCFNLPAY TCLREGPDHA PRFKAAVNFN GEQFESPGFF TTLRQAEHAA  60
   61 AEVALAALAR RGPSYSLAAR ILDETGVYKN LLQEVAQRVG APLPSYTTER SGLGHLPVFT 120
  121 CTVELAGITF TGDPAKNKKQ AEKNAASAAW SSLRQLVRQE ASSSNEPESN DEQEQIRIAR 180
  181 ALLNYRLKEK MAMANNPHAS PFPKKFPMQP ERRTAFPQSS HSSYSKILPL FRPKSNSRSR 240
  241 PESPAASDAA SQTPFRPTES PNPRSRFPAA EAAPYVPVGH FRMPCHSMAP PVTVRTSIPV 300
  301 FSAPPLPPPG ARTQQLPPLM SHPPPIRMAS PVRIRPAPPL FTPSAVQGPK PMMPVQIKDV 360
  361 QHQQIKETRS PVMPVQVKDA QNQLLKGSLS PVIPVQIKDV QSQPPKEALS PAIPVQIKDV 420
  421 QLQPRNEPVS IGKGVVPLPA IRPPVKVEAP AEVKEASQPV AGSSVVQCKA DTSPDSLPKT 480
  481 QLKTANADNA DAKDDHLPVD AEEVEDIIRH LELK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 14.0 RNase III endonuclease catalytic domain; RNase III, C-terminal domain
    2 View Details [165..287] deduced N/A No confident structure predictions are available.
    3 View Details [288..514] MSA 5.185996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.602312874472495 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle