| Protein: | SHL2_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1218 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SHL2_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
1214.0 | [0..20] | [1218..3] |
|
|
1206.0 | [0..21] | [1218..10] |
|
|
1206.0 | [0..20] | [1218..3] |
|
|
1164.0 | [0..31] | [1216..4] |
|
|
1144.0 | [0..31] | [1216..4] |
|
|
1132.0 | [0..31] | [1216..4] |
|
|
1129.0 | [0..31] | [1216..30] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MRSPRGGAAA QPSGRRGDTT AAAAGDLVTT QVSLGGFDAG VAAGDLADFL EHEVGLVWRC 60
61 RVKTSWTPPD SYPDFALPTA PASASAAAAP PRYDRVPPHA FVHFARPEGA RRAADLAGET 120
121 RLILRGKPLR VASAPDSSLR VSRRSSIAPF RFPDVRLEVG ALPSPGAFLA AWRGPDAGLD 180
181 LSVDPFDGCC RLVFTRDTAF TFPGFREVAA I
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [212-449] |
1 11 21 31 41 51
| | | | | |
1 RCDVKLEFPV RDVLEVRLYR LDCSLLLRLA AAPLVHYRTA DDDFHEPVPF DLLDDDDPWI 60
61 RTTDITPSGA IGRCGVYRIS FSARFWPKMD RALDYMRERR VAIVDCGGGW GPRRGLTVRD 120
121 ELEFGEPMQD VFFCLQHAEG LKFPLLFMVN ALVHKGIINQ HQLTPEFFSL LGRSEENVNV 180
181 AALRDFWGDK FPVFDACGRL KKALNRVARN PKLLCSKVGD DHAEVRRLVI TPTRAYCL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [450-1218] |
1 11 21 31 41 51
| | | | | |
1 PPEVERSNRV LRHYHEVADR FLRVTFMDEG MQVLNNNVLN SFTAPIVKDL MSNFFQQKTT 60
61 VYKRVRMLLT EGFHMCGRKY SFLAFSSNQL RDKSAWFFAE DRKTTVEAIR KWMGRFTSKN 120
121 VAKHAARMGQ CFSSTYATVT MRPDEVDESF DDVVHNEYIF SDGIGKITPD LALEVAERLQ 180
181 LTDNPPSAYQ IRFAGFKGVI AVWQGHGDGT RLFLRPSMRK FESNHLVLEV VSWTKFQPGF 240
241 LNRQIIILLS SLNVPDSIFW QMQETMLSNL NNILSDRDVA FEVLTTSCAD DGNTAALMLS 300
301 AGFEPRTEPH LKAMLLAIRS AQLQDLLEKA RIFVPKGRWL MGCLDELGVL EQGQCFIRAT 360
361 VPSLNSYFVK HGSRFSSTDK NTEVILGTVV IAKNPCLHPG DVRILEAVDV PELHHLVDCL 420
421 VFPQKGERPH ANEASGSDLD GDLYFVTWDE KLIPPGKKSW NPMDYSPPEA KQLPRQVSQH 480
481 DIIDFFLKNM ISENLGRICN AHVVHADLSE YGAMDEKCIH LAELAATAVD FPKTGKLAIM 540
541 PPHLKPKVYP DFMGKEDGQS YKSEKILGRL YRSIQEASNG DVVSQEVCTP NDLPYDIDLE 600
601 VPGASDFLAS AWQCKCSYDA QLSALLSQYR VRTEAELVTG HITFLVKNSS KKQGDIKDRL 660
661 KTAYSALRKE FKSTFESIAS DQCEIGDDEK NLLYEMKASA WYQVTYHPKW VEKSRGILGP 720
721 DGEEIPASLS FAWIPVDYLA RIKLRCHGKV RVEGQKPVER LAAYISERI
|
| Detection Method: | |
| Confidence: | 133.0 |
| Match: | 2j7nA |
| Description: | No description for 2j7nA was found. |
