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View Structure Prediction Details

Protein: gi|113549496, gi...
Organism: Oryza sativa Japonica Group
Length: 731 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113549496, gi....

Description E-value Query
Range
Subject
Range
gi|18568270, gi|... - gi|219363035|ref|NP_001136793.1| hypothetical protein LOC100216938 [Zea mays], gi|18568270|gb|AAL760...
628.0 [0..37] [731..24]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVAPAMIA AAAGGGGGYD GEEADAGAAV VEKALPNGDV YRGGFAGGAP HGKGKYVWAD  60
   61 GCMYEGEWRR GKASGKGRFS W

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.86
Match: 1n6cA
Description: Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain; Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [82-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSGATFEGEF RGGRIEGQGV FVGPDGATYR GAWAADRRHG VGAKSYANGD YYEGQWRRNL  60
   61 QDGHGRYVWA NGNQYVGEWR AGVISGRGVL IWANGSRYDG VWENGVPRGT GVFTWPDGSR 120
  121 YVGSWPRSCV DMPAISGTFF PPVGAGGGGA VRKRSSVEGV GDKASAVPRI CIWESEGEAG 180
  181 DITCDIVDAL EASMLYREAT TVGGGVPYVR TQRSTRRVAS GG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2bibA
Description: Crystal structure of the complete modular teichioic acid phosphorylcholine esterase Pce (CbpE) from Streptococcus pneumoniae
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [304-731]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCWAPSAAAT PEGKRPGQTI SKGHKNYELM LQLQLGIRHS VGKSAAVPMR ELSPADFDPK  60
   61 EKFWTRFPPE GSKVTPPHSS SDFRWKDYCP MVFRHLRKLF SVDPADYMIA ICGNDALREL 120
  121 SSPGKSGSFF YLTQDDRFMI KTVKKSEVKL LIRMLPSYYQ HVSQYRDSLI TRFYGVHCVK 180
  181 PLNGQKVRFI VMGNLFCSEY RIHRRFDLKG SSYGRTADKF DDEIDETTTL KDLDLNFVFR 240
  241 LQRTWFRDLH EQLRRDCEFL ESEGIMDYSF LVGVHFCDDL SASKTGLSTF TASPKFSMKR 300
  301 ESFQGGGGMP ELCFSDSDFD RIPDCRKPLI RLGAHMPARA EQASRRSEFD PFLLNGGGFL 360
  361 APNQTGEVYD VILYFGIIDI LQDYDITKRL EHAYKSLQTD PNSISAVDPK LYSKRFQDFI 420
  421 GRIFVEDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.69897
Match: 1bo1A
Description: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
inositol or phosphatidylinositol kinase activity 4.06973114636425 bayes_pls_golite062009
phosphatidylinositol phosphate kinase activity 3.5005619620026 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 3.04766540645426 bayes_pls_golite062009
lipid kinase activity 3.03220928059157 bayes_pls_golite062009
1-phosphatidylinositol-4-phosphate 5-kinase activity 3.00599233846946 bayes_pls_golite062009
kinase activity 2.85461858246731 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.23569102640176 bayes_pls_golite062009
catalytic activity 1.87792712964225 bayes_pls_golite062009
transferase activity 1.20817067352467 bayes_pls_golite062009
signal transducer activity 1.15068527302487 bayes_pls_golite062009
molecular transducer activity 1.15068527302487 bayes_pls_golite062009
binding 1.02604095388529 bayes_pls_golite062009
protein kinase activity 0.887549500886727 bayes_pls_golite062009
protein binding 0.382966234080422 bayes_pls_golite062009
protein serine/threonine kinase activity 0.0651942184115614 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle