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View Structure Prediction Details

Protein: gi|34395075, gi|...
Organism: Oryza sativa Japonica Group
Length: 671 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34395075, gi|....

Description E-value Query
Range
Subject
Range
gi|28564581 - gi|28564581|dbj|BAC57690.1| putative receptor-like protein kinase [Oryza sativa Japonica Group]
483.0 [0..1] [671..25]

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Predicted Domain #1
Region A:
Residues: [1-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIALSFLLH ILLFHGFNLV LAVSASDDQF VFSGFSGANV TLDGTATVTA GGLLELTNGT  60
   61 TQLKGHAFFP APLSFRGSLN GTVQSFSASF VFAILTSYPN LSCHGIAFVV APSNNLSTAL 120
  121 AAQYMGLTNI DNNGNASNHI FAAEIDTMQN VEFQDINNNH IGVDINGLHS VESHYAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.09691
Match: 1avbA
Description: Phytohemagglutinin-L, PHA-L, also arcelin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.40096962515027 bayes_pls_golite062009
protein binding 1.80794638640093 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.67818953913801 bayes_pls_golite062009
kinase activity 1.67164937001078 bayes_pls_golite062009
fibroblast growth factor binding 1.5757435501069 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.57319468996942 bayes_pls_golite062009
protein kinase activity 1.4419983524192 bayes_pls_golite062009
transferase activity 1.33812952885475 bayes_pls_golite062009
cytoskeletal protein binding 1.26174167673763 bayes_pls_golite062009
molecular transducer activity 1.24423621131253 bayes_pls_golite062009
signal transducer activity 1.24423621131253 bayes_pls_golite062009
actin binding 0.64509193674198 bayes_pls_golite062009
structural molecule activity 0.591248843231149 bayes_pls_golite062009
hydrolase activity 0.488963797364099 bayes_pls_golite062009
receptor activity 0.376562682962271 bayes_pls_golite062009
transcription regulator activity 0.372701974560119 bayes_pls_golite062009
nucleic acid binding 0.339759264844777 bayes_pls_golite062009
transmembrane receptor activity 0.213382263378401 bayes_pls_golite062009
DNA binding 0.157628282318248 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [178-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYDKNGSFHN MNLISGDVMQ AWVDYDGDIA QINITIGPID MSKPGRSLIS TTYNLSDVLM  60
   61 EPSFIGFSSA TGPINSRHYI LGWSFGMNKP APNIDIAKLP KLPRLAPKPQ SKVLVILLPI 120
  121 AIAAFILSVG IAMVFLVRRR QRYAELREDW EDEF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.46
Match: 1qmoE
Description: Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [332-671]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPHRFAYKDL LHATDGFSDK HILGAGGFGR VYKGILPKSK LEVAVKRVSH ESRQGMKEFV  60
   61 AEVASIGRIR HRNLVQLLGY CRRKGELLLV YDYMSNGSLD RYLHYEGNKP VLDWVQKFQI 120
  121 IKDVASGLLY LHEKWDKVVI HRDIKASNVL LDKEMNARLG DFGLARLYDH GTDAHTTHMV 180
  181 GTMGYLAPEL IHTGKASTLT DVFAFGTFLL EVICGQRPIK EDAHGNQILL VDWVLEHWHN 240
  241 ESLLDTVDPR LQGDYNVEEA CLVLKLGLLC SHPSTNARPC MQQVVDYLEG DTPVPELAST 300
  301 HRNFNELASM RKKGFDPYIM SYNPSSTVSF GTVSDLSGGR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.0
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle