Protein: | gi|34395075, gi|... |
Organism: | Oryza sativa Japonica Group |
Length: | 671 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34395075, gi|....
Description | E-value | Query Range |
Subject Range |
|
483.0 | [0..1] | [671..25] |
Region A: Residues: [1-177] |
1 11 21 31 41 51 | | | | | | 1 MKIALSFLLH ILLFHGFNLV LAVSASDDQF VFSGFSGANV TLDGTATVTA GGLLELTNGT 60 61 TQLKGHAFFP APLSFRGSLN GTVQSFSASF VFAILTSYPN LSCHGIAFVV APSNNLSTAL 120 121 AAQYMGLTNI DNNGNASNHI FAAEIDTMQN VEFQDINNNH IGVDINGLHS VESHYAG |
Detection Method: | |
Confidence: | 6.09691 |
Match: | 1avbA |
Description: | Phytohemagglutinin-L, PHA-L, also arcelin |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 2.40096962515027 | bayes_pls_golite062009 |
protein binding | 1.80794638640093 | bayes_pls_golite062009 |
phosphotransferase activity, alcohol group as acceptor | 1.67818953913801 | bayes_pls_golite062009 |
kinase activity | 1.67164937001078 | bayes_pls_golite062009 |
fibroblast growth factor binding | 1.5757435501069 | bayes_pls_golite062009 |
transferase activity, transferring phosphorus-containing groups | 1.57319468996942 | bayes_pls_golite062009 |
protein kinase activity | 1.4419983524192 | bayes_pls_golite062009 |
transferase activity | 1.33812952885475 | bayes_pls_golite062009 |
cytoskeletal protein binding | 1.26174167673763 | bayes_pls_golite062009 |
molecular transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
signal transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
actin binding | 0.64509193674198 | bayes_pls_golite062009 |
structural molecule activity | 0.591248843231149 | bayes_pls_golite062009 |
hydrolase activity | 0.488963797364099 | bayes_pls_golite062009 |
receptor activity | 0.376562682962271 | bayes_pls_golite062009 |
transcription regulator activity | 0.372701974560119 | bayes_pls_golite062009 |
nucleic acid binding | 0.339759264844777 | bayes_pls_golite062009 |
transmembrane receptor activity | 0.213382263378401 | bayes_pls_golite062009 |
DNA binding | 0.157628282318248 | bayes_pls_golite062009 |
Region A: Residues: [178-331] |
1 11 21 31 41 51 | | | | | | 1 YYDKNGSFHN MNLISGDVMQ AWVDYDGDIA QINITIGPID MSKPGRSLIS TTYNLSDVLM 60 61 EPSFIGFSSA TGPINSRHYI LGWSFGMNKP APNIDIAKLP KLPRLAPKPQ SKVLVILLPI 120 121 AIAAFILSVG IAMVFLVRRR QRYAELREDW EDEF |
Detection Method: | |
Confidence: | 4.46 |
Match: | 1qmoE |
Description: | Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [332-671] |
1 11 21 31 41 51 | | | | | | 1 GPHRFAYKDL LHATDGFSDK HILGAGGFGR VYKGILPKSK LEVAVKRVSH ESRQGMKEFV 60 61 AEVASIGRIR HRNLVQLLGY CRRKGELLLV YDYMSNGSLD RYLHYEGNKP VLDWVQKFQI 120 121 IKDVASGLLY LHEKWDKVVI HRDIKASNVL LDKEMNARLG DFGLARLYDH GTDAHTTHMV 180 181 GTMGYLAPEL IHTGKASTLT DVFAFGTFLL EVICGQRPIK EDAHGNQILL VDWVLEHWHN 240 241 ESLLDTVDPR LQGDYNVEEA CLVLKLGLLC SHPSTNARPC MQQVVDYLEG DTPVPELAST 300 301 HRNFNELASM RKKGFDPYIM SYNPSSTVSF GTVSDLSGGR |
Detection Method: | |
Confidence: | 70.0 |
Match: | 2qkwB |
Description: | No description for 2qkwB was found. |